Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02716 ATGTGGCCATTCAGCAGAAGAGGGCCTTCTGGGTTTTCATGGTCTTCCACTGCTGAACAAGCTACTGAAGGGATCGATGGCACTGCCCCCACTGCCATTGTCACTGGAGCATCCAGTGGGATTGGAATTGAGACAACACGTGTTCTTGCTTTGCGTGGTGTCCATGTAATTATGGGTGTGAGAAACATGGTTGCTGCCAAAAATGTCAAAGAAACAATACTAAAGGAGATTCCCTCTGCTAAACTTGATGCCATGGAGTTAGATCTCAGTTCTATGGACTCTGTCAAGAAATTTGCATCAGAGTTCAATTCCTCTGGCCTTCCATTGAACATCTTAATACATTTTCTCTTGACAAATCTTTTGTTGGATACAATGAAGAAAACAACACGTGAAAGTAAGAAAGAAGGAAGAATTGTTAATGTCTCCTCCTGTGCTTACCGATATCCATTTGGGGAAGGAATCTATTTTGACAAAATCAATGACCAATCAAGTTACAAAAACTGGCATGCATATGTGCAGTCAAAGCTTGCTAACATTTTACATGCCAACGAGCTTGCAAGACGTCTCAAGGAAGATGGAGTTGATGTTACTGCAAATTCTCTTCATCCAGGAACAATAGTCACCAATATTTTCCGTCATAACAGTGCAATGAACGGTCTGTTTAATGTGATTGGGAGATTTGTGCTGAAAAATGTCCAGCAGGGAGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAATTAGTGGCAAATATTTTTCAGACTGTAATGTGGCCGAAACAACCTCAAAGGGGAGAGACGCTGATTTGGCTAAGAAACTCTGGGATTTCAGCATGAATTTGATTAAGCAGAATGAATGTCAAGTTTTATCTTGA 885 0.4136 MWPFSRRGPSGFSWSSTAEQATEGIDGTAPTAIVTGASSGIGIETTRVLALRGVHVIMGVRNMVAAKNVKETILKEIPSAKLDAMELDLSSMDSVKKFASEFNSSGLPLNILIHFLLTNLLLDTMKKTTRESKKEGRIVNVSSCAYRYPFGEGIYFDKINDQSSYKNWHAYVQSKLANILHANELARRLKEDGVDVTANSLHPGTIVTNIFRHNSAMNGLFNVIGRFVLKNVQQGAATTCYVALHPQVKGISGKYFSDCNVAETTSKGRDADLAKKLWDFSMNLIKQNECQVLS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02716 294 Pfam short chain dehydrogenase 31 113 IPR002347 -
Rops6g02716 294 PANTHER RETINOL DEHYDROGENASE 113 286 - -
Rops6g02716 294 MobiDBLite consensus disorder prediction 1 20 - -
Rops6g02716 294 PRINTS Glucose/ribitol dehydrogenase family signature 194 211 IPR002347 -
Rops6g02716 294 PRINTS Glucose/ribitol dehydrogenase family signature 171 190 IPR002347 -
Rops6g02716 294 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Rops6g02716 294 PRINTS Glucose/ribitol dehydrogenase family signature 130 146 IPR002347 -
Rops6g02716 294 Gene3D - 112 289 - -
Rops6g02716 294 Gene3D - 18 111 - -
Rops6g02716 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 263 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02716 Rops-Chr6 48828284 48845044 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02716 - - gmx:100796920 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02716 6 48828284 48845044 Rops6g02716 6 48828284 48845044 ECH
Rops5g00912 5 17631269 17632120 Rops6g02716 6 48828284 48845044 PCT