LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops6g02710	ATGGATTCGAGCGACAAGAGGGATGATGAAGATTGGGAATTTAGCGATAAGAGGAAGCAAAGGTCACGAAAGTATGGTAATGGGGGGGACGAGGCTGATGCAGAAGGTGAAGTCGAAGGTGAAGAAGCTTCTGATGGAAGTGGAAGAAGGAAGCGTTCTAGCAAAGTTGACGGTGACGATTACGATTCACGTTCGAAGCAGCATCTGTCTAAGAAGAGGCAAGAAGAGAGCACATTGGAAAAGTTGAGTAGTTGGTATGAGGATGGAGAATTGGATGCTGGAGACAAGATTGGGAGGAAGGTTTCCTCTAATTCCAAGCATGATGGTAGCAAAGAGGATTATAGGTACTCGGAAAAAGGTGAAAGTGGCCGCCGTGAGCAGGGTAAGAGTTCTAGAAGGAAGTGGGATGAAGCTGACACTGGCAGTGTGAGGAGAACGCAAGATAGTGGTTCCGAGAAAGGGGATTTGAGGAGTGGTAAGCGTGATGGTTCTAGGGAGAGGAGTGGATCTGCTAGGAATGAACATGGGGAGAGTAAAACTTCTGGTAGTGAAAGAGTTGTTAAATCTGGGAGTAAGGAAGATAGAAGAGGTGGTGATTCTGAGAGAGGTAAGAGTCGCGAGGATAGGGGAGAGAAGCCTAGGCGTCACAGAACGCCTACTGGTTACGATGGGGCTGAAACATGGGACAGGTCCGGGAATGCAGATGAGGATGGAAGTGTGAGGGTTAGGGATAAAAGTACTAGAGAAAGTGGTAACTCGAACAGATCAAGGACACCGGAGAGGAGTGGGAAACGCCATCAAGATTCAGAGAACTCGGAGATGGATTATGAAAGAAGCGGTAGCTTTAAAAGAAAGGAACTTGAAAGTGATGGATATAAGGATGATAGATCCAAAGGGAAAGATGATACTTGGAATGACAGGAGGAAGGATCGGGAAAGCTCTAAAGAAAGTTGGAAAAGGAGGCAACCGAGTAATGTTGACAAAGATTCAAAAAATGAGGATGGTGTTTATGATCACAACAGAGAATGGGATCTGCCTAGACACGGTTATGATAGGATGGACAGTGAAAGACCACATGGTCGGTCTGGTGGTAGAAAAGATGGAATCAGGGGGGAAGCCGTGAAAACATCAACGAAGTTTGGAATTTCTAATGATAATTATGATGTGATAGAGATCCAGCCCAAGTTTGTTGACTATGGGAAGGCAGAATCTGTATCCAACCTTACCAAGAGAACTGAAGCTAATCAACAGCACAATGCTAAATCAGGTGCTAATGAAGAATGGGCATATCATCAAGAAGAAAAAGCAAGAAAGAGTGATTTATCTGGTTCTGGGACACCTGGTGAAGATATGAAGGATAGATATGCCGATGATGACTATGATTTTTATGGGGGAAGAGGAAGAAGTCAGAAAGGTGTTGCATCCTCTCGCGGTACTGGTGGTCAAAGTTCTAGTAGTGGTGGCTCACAGCCTCAATATGGAAACCTGGAGTCTGGATCCTTTAATAGAGCTGGTCCACAAGGAATGAAAGGGAATAGGGTTGGTAGAGGAGGAAGGATTAGGCCTGCTGGGAGAGACAATCAGCAGGTTGGAATGCCATTGCCAATGATGGGATCGCCCTATGGACCTATCGGCATGCCTCCGCCTGGGCCAATGCAGCCTCTTACCCATGGTATGTCACCTGCTCCTGGTCCACCAATTTCCCCTGGAGTCTTCATTTCGCCATTTACTCCACCTGTTTGGCCTGGAGCTAGAGGTGTCGATATGAACATAATAGGTGTTCCACCCGCTGTGTCTCCTGTACCCCCCGGTCCTTCAGGTCCAAGATTTAATGCTGCTAATATGGGGAACCCACCAAATCCTGCAATGTATTATAACCAATCTGGCCCTGGAAGGGGAATTCCTCCAAGCATTTCTAGTCCTGGTTTTAATACTACAGGACCAATGGGTAGAGGAACACCACCTGATAAAACTCCAGGGGGATGGGTTCCTCCTAAAAGTAGTGGAACTCTTGGCAAAGCTCCTTCCAGAGGTGAACAGAATGATTATTCTCAAAACTTTGTTGACACTGGCATGCGGCCGCAGAATTTCATTAGGGAGCTTGAGCTCACAAATGTTGTAGAGGACTACCCCAAACTTAGGGAGCTTATACAGAAAAAGGATGAGATTGTAGAAAAATCTGCATCTACTCCCATGTATTATAAGTGTGATCTGAAAGAATTTGAGCTGTCTCCAGAGTTCTTTGGAACAAAGTTTGATGTCATTCTTATCGATCCCCCATGGGAGGAGTATGTGCACCGTGCCCCTGGTGTTGCTGACCACATGGATTACTGGACATTTGAAGAAATAATGAATCTCAAGATTGAGGCTATTGCAGATACACCTTCTTTCATCTTCCTTTGGGTGGGTGACGGTGTAGGCCTTGAACAAGGTCGTCAATGTCTAAAGAAGTGGGGATTTCGTAGATGTGAAGATATATGTTGGGTAAAGACAAACAAAAATAATGCAACTCCAGGACTGCGGCATGATTCACATACTTTATTTCAACATTCAAAGGAACACTGCTTGATGGGCATAAAAGGAACTGTTCGTCGAAGTACGGATGGCCATATAATTCATGCCAACATTGACACTGATGTAATTATTGCTGAAGAACCTCCTTATGGTTCCACACAAAAGCCTGAAGATATGTATAGGATTATTGAGCACTTTGCCCTTGGAAGGAGGAGACTTGAACTATTTGGTGAAGACCACAATATCCGAGCTGGATGGCTGACTGTTGGTAAAGAACTGTCATCTTCAAATTTTAATAAAGAGGCATATGTCAAGAGTTTTGCTGACAAAGATGGGAAAGTATGGCTGGGAGGTGGAGGAAGAAATCCACCTCCGGAGGCACCTCATCTGGTGGTGACTACTCCTGATATAGAGGCTCTTAGGCCGAAGTCCCCAATGAAGAACCAGCAACAAATGCAGCAGCAGCAATCAGTATCCATTTCTTTGACCTCAGCTAGCGCATCAAACAGAAGGCCTGCCGGGAATTCACCACAGAATCCAACTGCACTCGGTGTCAATCAAGACGCTTCTAGCTCAAACCCTTCTACTCCAGCTCCTTGGGCTTCACCTCTGGAGAACTTTAAGGGACGTGAAGGCTCTGTATTGCCTTCGGATGATAAAGTATGTGATATGTATGGGTTTCATGGACCAGCAGCGGCAGGCTATCTAGATTTTGAATCATACAGACAAATGAATATGTTGTAG	3258	0.4537	MDSSDKRDDEDWEFSDKRKQRSRKYGNGGDEADAEGEVEGEEASDGSGRRKRSSKVDGDDYDSRSKQHLSKKRQEESTLEKLSSWYEDGELDAGDKIGRKVSSNSKHDGSKEDYRYSEKGESGRREQGKSSRRKWDEADTGSVRRTQDSGSEKGDLRSGKRDGSRERSGSARNEHGESKTSGSERVVKSGSKEDRRGGDSERGKSREDRGEKPRRHRTPTGYDGAETWDRSGNADEDGSVRVRDKSTRESGNSNRSRTPERSGKRHQDSENSEMDYERSGSFKRKELESDGYKDDRSKGKDDTWNDRRKDRESSKESWKRRQPSNVDKDSKNEDGVYDHNREWDLPRHGYDRMDSERPHGRSGGRKDGIRGEAVKTSTKFGISNDNYDVIEIQPKFVDYGKAESVSNLTKRTEANQQHNAKSGANEEWAYHQEEKARKSDLSGSGTPGEDMKDRYADDDYDFYGGRGRSQKGVASSRGTGGQSSSSGGSQPQYGNLESGSFNRAGPQGMKGNRVGRGGRIRPAGRDNQQVGMPLPMMGSPYGPIGMPPPGPMQPLTHGMSPAPGPPISPGVFISPFTPPVWPGARGVDMNIIGVPPAVSPVPPGPSGPRFNAANMGNPPNPAMYYNQSGPGRGIPPSISSPGFNTTGPMGRGTPPDKTPGGWVPPKSSGTLGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVEKSASTPMYYKCDLKEFELSPEFFGTKFDVILIDPPWEEYVHRAPGVADHMDYWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKNNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTVGKELSSSNFNKEAYVKSFADKDGKVWLGGGGRNPPPEAPHLVVTTPDIEALRPKSPMKNQQQMQQQQSVSISLTSASASNRRPAGNSPQNPTALGVNQDASSSNPSTPAPWASPLENFKGREGSVLPSDDKVCDMYGFHGPAAAGYLDFESYRQMNML*	1086

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops6g02710	1085	ProSiteProfiles	mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile.	525	989	-	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	408	533	-	-
	Rops6g02710	1085	PANTHER	N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT	42	1048	IPR045123	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	450	465	-	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	982	1038	-	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	630	680	-	-
	Rops6g02710	1085	Pfam	MT-A70	752	930	IPR007757	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	1	31	-	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	632	647	-	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	42	373	-	-
	Rops6g02710	1085	ProSiteProfiles	MT-A70-like family profile.	711	950	IPR007757	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	408	423	-	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	981	1050	-	-
	Rops6g02710	1085	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	745	900	IPR029063	-
	Rops6g02710	1085	ProSitePatterns	N-6 Adenine-specific DNA methylases signature.	755	761	IPR002052	GO:0003676\|GO:0008168\|GO:0032259
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	1	387	-	-
	Rops6g02710	1085	MobiDBLite	consensus disorder prediction	472	502	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops6g02710	Rops-Chr6	48759316	48765454	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops6g02710	K23960		-	gmx:100798100	1752.64

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops6g02710	6	48759316	48765454	Rops6g02710	6	48759316	48765454	ECH