Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02698 ATGATTGCTCCGGGGATTTTCCACTTCCTTATTGATAGACACCTCAGATTCTTACAATCTCGACAACATGCTCGGTTACTATCAGCTCGCCTTTTACCTTGTGGTGTCGTTGAGCTCAACTTCTCCAAGAGTCCAAGTTTATATTATAACCCCACGAGCTTAGTGTTCATAAGTGTGCCCAAAATTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCCAGTTGTAATATGGAGACAGATAAGCTCAGTGTCACCATCAAAAGTGTGGGTAGCTGGTCAAACAAGCTTTATCAAGAACTTTCTTCTTCATCTTTTGATCATCTCAATGTTTCAGTTGAAGGACCCTATGGACCACGTACTACACAATTTCTAAGACACGAGCAACTTGTGATGGTGAGTGGTGGAAGTGGCATCACTCCTTTCATATCCATAATCCGAGAGCTTATATTCCAAAGCCAACAACAAGAATCCCAAATTCCAAAAGTCCTACTAGTTTGTGCTTTCAAGAATTCTGCTGATCTAACCATGTTAGATCTTATGCTTCCTGTTTCTGGCACAACAAGTCAAATCTCACGGCTTGAGTTGCAAATTGAAGCCTATATTACCAGAGAAAACGAAGAACCCCCAAGAGAATCTCAGAAACACATCCAAACCATATGGTTTAAGCCAACCCTCTCAGACTCTCCCATCTCAGTTGTATTAGGCCCAAACAACTGGCTATGGCTTGGTGCTATAATCACATCATCATTCCTCATGTTTCTCCTCCTTTTAGGGATTGTCACTCGTTATTATATTTACCCAATTGAAAATAACACCAATGAAGTTTATCACTGGACCTTCAAGGTTATGTGGTACCTGTTTCTACTCTGTGCATGCATATGTATATGTTCTAGTGCAGTTTTTCTTTGGTGGAAGAGACAAAACACCTTGGAAAGTAAGCAAATCATGAATGTAGAAGTTCCAACACCAACAAGATCATCAGGGTCATGGATTTATGGCTCAGAGAGAGAGCTTGAAAGCCTTTTCCATCAGTCTTTAGTGCAAGCTACCAAAGTACATTTTGGTGCAAGGCCTGATCTCAAGAAAATTCTGTTTGAGTGCAAAGACAAAGATGTTGGAGTCTTTGTCTGTGGCCAAAGAAACTTGAGACATGAAGTTGCCAGAATTTGTGCTTCGGGTTTGGCTGATAATCTTCACTTTGAACCCATCAGCTTCAACTGCTCTGTCCGGGACAAGCTTGGAACAGAATTGGAGGAGAGCTGCTGCATCACCTTGTATGCTGATTTGCAGGAGTAG 1299 0.4165 MIAPGIFHFLIDRHLRFLQSRQHARLLSARLLPCGVVELNFSKSPSLYYNPTSLVFISVPKISKLQWHPFTVTSSCNMETDKLSVTIKSVGSWSNKLYQELSSSSFDHLNVSVEGPYGPRTTQFLRHEQLVMVSGGSGITPFISIIRELIFQSQQQESQIPKVLLVCAFKNSADLTMLDLMLPVSGTTSQISRLELQIEAYITRENEEPPRESQKHIQTIWFKPTLSDSPISVVLGPNNWLWLGAIITSSFLMFLLLLGIVTRYYIYPIENNTNEVYHWTFKVMWYLFLLCACICICSSAVFLWWKRQNTLESKQIMNVEVPTPTRSSGSWIYGSERELESLFHQSLVQATKVHFGARPDLKKILFECKDKDVGVFVCGQRNLRHEVARICASGLADNLHFEPISFNCSVRDKLGTELEESCCITLYADLQE* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02698 432 SFLD Ferric reductase subgroup (FRE) 2 407 - -
Rops6g02698 432 FunFam Ferric reduction oxidase 3 116 234 - -
Rops6g02698 432 Pfam Ferric reductase NAD binding domain 127 392 IPR013121 GO:0016491
Rops6g02698 432 Gene3D - 111 238 IPR039261 -
Rops6g02698 432 Pfam FAD-binding domain 25 119 IPR013112 GO:0016491
Rops6g02698 432 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 111 186 IPR039261 -
Rops6g02698 432 Gene3D - 308 407 IPR039261 -
Rops6g02698 432 SFLD Ferric Reductase Domain 2 407 - -
Rops6g02698 432 CDD NOX_Duox_like_FAD_NADP 26 204 - -
Rops6g02698 432 PANTHER NADPH OXIDASE 2 406 - -
Rops6g02698 432 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 19 123 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02698 Rops-Chr6 48400170 48403309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02698 1 407 Miscellaneous Gene Families AT5G23990 60.048 1.03e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02698 K00521 - gmx:112998154 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02698 6 48400170 48403309 Rops6g02698 6 48400170 48403309 ECH