Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02680 ATGAAGAAAGTTGTGTTGAAGGTGGAAATATATGATGACAGAACCAAACAAAAAGCTATGAAGGCAGTCTCTGGCCTTTCAGGGGTTGAGTCAATTTCTGTGGACATGAAAGACAAGAAACTAACCTTAACGGGAAACATTGATCCAGTACATGTGGTGGCCAAACTAAGGAAGTTTTGTCATACGGATATAGTTTCTGTTGGAGCAGCAAAAGAGGAAAAGAAGGATGGACCAAAGAAAGATGATCAAAAGAAGCCAGATGATAAGAAGGATTCAACAAAAGAAAATGTGACTAATCTTCTCAAGTTACAAGAAGCTTATGCCTATCATTATCAGATGAAACCACAATACAATCCATATTACCATGCCATAAGTGTGGAAGAGGATCCTAATAGCTGTGTCATCATCTAA 411 0.3796 MKKVVLKVEIYDDRTKQKAMKAVSGLSGVESISVDMKDKKLTLTGNIDPVHVVAKLRKFCHTDIVSVGAAKEEKKDGPKKDDQKKPDDKKDSTKENVTNLLKLQEAYAYHYQMKPQYNPYYHAISVEEDPNSCVII* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02680 136 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 133 - -
Rops6g02680 136 Pfam Heavy-metal-associated domain 12 58 IPR006121 GO:0046872
Rops6g02680 136 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
Rops6g02680 136 Gene3D - 1 73 - -
Rops6g02680 136 MobiDBLite consensus disorder prediction 68 96 - -
Rops6g02680 136 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02680 Rops-Chr6 48198160 48199482 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02680 - - ccaj:109793119 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02680 6 48198160 48199482 Rops6g02680 6 48198160 48199482 ECH