Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02669 ATGTCAACCCCATTAGAGAGGTACCAAAAACTTAGTCTGAAAGAGTCTTTACCAAAAAGCTATAGATACCCAATTGCCTGCAAAGAGCTTAGCTTTATTCTGAAGGATGGTTATCATCAATTTCCCAAGAATTTGCAAGCCCTCGTTTTCGAAGACACTCTCACCGCCATACGCCTCCTCCCTGAAATACAGACTCAGAGTGCTGTTTCAGCAGTCCAACTCCTCCTTCGGAGTATAGAAGCAGCACTACCGAAACAGAAAAAGAATGTTGCTCTAGCAGAATTTAAGCATGCTATGGTTGCTCATAAGAGGCGCTGTAAAGCTCACCATGTAGAAAAAGGTTCATTTCAACTGCCACAAGATATTCTTGTACATATTTTCAGTTTTCTAGATATACGATCTTTGGCCTCAGCTGGGCTAGTCTGCTGGTCATGGAACTTAGCTGCAAATGATAACCATCTGTGGGAGTTGCAGTATGTTGTACTGTATGATAGTGCGGCTAAACAGCAGCCTATGAGACTGGTTGAAGACAGGAACAATAGGCTTTTACAGAAACCTGTATATACTACAACCATTACTGACTGGAAAGAGGCTGTTAAAGGAGCATATACTGGAGCATTATCTATGAAGTTAACAACCAATCGGGGATACTGTGAACACTGCAAAACTTTAGTTTGGCTAAACAACTCAAAATGCCCCAATGTATATTGTGGAATGATATCTGAAATTCAAGATATCAAGCCTGTAACAGGACACCAGGTTGTGGAATATCTTCTAGATTCTTTATCCATAACTTCTTCGTCAGACAGTGACAGTGATTCAGAAGGAGGACCAGTTTCTAGGTTATGGGCATATCCCAAGCATATAAGATAA 873 0.4089 MSTPLERYQKLSLKESLPKSYRYPIACKELSFILKDGYHQFPKNLQALVFEDTLTAIRLLPEIQTQSAVSAVQLLLRSIEAALPKQKKNVALAEFKHAMVAHKRRCKAHHVEKGSFQLPQDILVHIFSFLDIRSLASAGLVCWSWNLAANDNHLWELQYVVLYDSAAKQQPMRLVEDRNNRLLQKPVYTTTITDWKEAVKGAYTGALSMKLTTNRGYCEHCKTLVWLNNSKCPNVYCGMISEIQDIKPVTGHQVVEYLLDSLSITSSSDSDSDSEGGPVSRLWAYPKHIR* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02669 290 Gene3D - 96 156 - -
Rops6g02669 290 SUPERFAMILY F-box domain 117 167 IPR036047 GO:0005515
Rops6g02669 290 ProSiteProfiles F-box domain profile. 112 158 IPR001810 GO:0005515
Rops6g02669 290 CDD F-box_SF 117 150 - -
Rops6g02669 290 SMART fbox_2 118 158 IPR001810 GO:0005515
Rops6g02669 290 Pfam F-box-like 117 156 IPR001810 GO:0005515
Rops6g02669 290 PANTHER OS05G0526300 PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02669 Rops-Chr6 48044097 48048644 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02669 - - gmx:100789652 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02669 6 48044097 48048644 Rops6g02669 6 48044097 48048644 ECH