Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02606 ATGATCACGAGACCAATAATCCATCATGCTGTCAAGGCCACAGCATCTGCACATGTCCGAACATTTAGCTTGTGGTCGATGAAGAAGGACCCAGACTTAGAATCAGCGCTATCTCGCAATCGACGGTGGATAGTGAACAACCAAATCAAGAACATCATCCTTCGTTACCCTAACAACGAGATCCCCATCGAAACCCTCCAGAAGAAGTTCAAAACCCTCGATCTCCAAGGCAAAGCCCTCAATTGGGTCTCCAAATACCCTTCCTGCTTCGAGGTCCATGATCGCCGATGCACCCTCACCAAACGCTTGATGTCCCTCGTCCACGAAGAACAATCCCTCATCGATTCCCTCGAACCTGTCTTCGTTCGCCGTTTGGCCAAACTCTTGATGTTGTCCCTCAACAACAGGCTCAACATCCTCAAAATCAACGAATTTAAGCGCTATTTCGGGCTCCCTGATGATTACTTGATTAGGATTGTCCCTAAATATCCCCATTTGTTCCGAATTGTGAATGAGAGTGGGAGGAGGAGTTCCATGATGATTGAATTGCTGCATTGGGACCCTGATTTTGCTGTTTCCGAGGTTCAAGCTTCAGCGCGGAAGCACGGCACCAAGCCTTGCTTTTCGTGTTCTCTGCCTTCAAGTTGGGTGAAATCATGGGAGAAATTTCGCGAATTTGATTCGATTCCTTATGTTTCGCCTTATGTGGATCCTAGAGGTTTGGTGGAGGGATCAAAGGAAATAGAGATGAGGAATGTGGGTTTGGTGCATGAGTTGTTGTCATTGACTCTTTGGAAGAAAGCCTCCATTATGAAATTGGGTCATTTCAAGAGGGAGTTTCTTTTGCCTGAGAAGTTCAATGTCTTGTTGCTCAATCACCCTGGCATTTTCTATGTTTCCAATAAGTATCAAATTTACACTGTTCTCCTTAGAGAGGCTTATGTTGGGTCTCAACTTGTGGATAAAGATCCATTGGTGGTTGTGAAAGAGAAATTTGGGGAACTGATGCAGGAGGGACTTCATGAGTACAATCAAAGGCGGCGTCTCCTTAATATGGAAAAGAGGAGAAAGAAAGGTGTTCCTTTGACTAATGTGGATGAAATGAAGGGTGGGAGAAGAAGGAGAAGTGGTGAAATCTCCGACTCTGATGATGATGGGGACAGGAGTAAGATGGGAGGGTTGCTTGACCCGGAAGAAAGAAAACGGTTTTATAAAGTTCTTTTTGATGATGATGCTTCGTGA 1242 0.4517 MITRPIIHHAVKATASAHVRTFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRYPNNEIPIETLQKKFKTLDLQGKALNWVSKYPSCFEVHDRRCTLTKRLMSLVHEEQSLIDSLEPVFVRRLAKLLMLSLNNRLNILKINEFKRYFGLPDDYLIRIVPKYPHLFRIVNESGRRSSMMIELLHWDPDFAVSEVQASARKHGTKPCFSCSLPSSWVKSWEKFREFDSIPYVSPYVDPRGLVEGSKEIEMRNVGLVHELLSLTLWKKASIMKLGHFKREFLLPEKFNVLLLNHPGIFYVSNKYQIYTVLLREAYVGSQLVDKDPLVVVKEKFGELMQEGLHEYNQRRRLLNMEKRRKKGVPLTNVDEMKGGRRRRSGEISDSDDDGDRSKMGGLLDPEERKRFYKVLFDDDAS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02606 413 Pfam Plant organelle RNA recognition domain 28 339 IPR021099 GO:0003723
Rops6g02606 413 MobiDBLite consensus disorder prediction 360 395 - -
Rops6g02606 413 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 19 369 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02606 Rops-Chr6 46843961 46847122 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02606 - - gmx:100814115 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02606 6 46843961 46847122 Rops6g02606 6 46843961 46847122 ECH