Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02604 ATGGCGGATCGAGGAGAAGATGAGGACCTGCAAATGGCGATTCGGATGAGCATGCAACGCGGGACGCCGGAGCCGAAGCGTAGCAAGCCGAGGGACGCCGTTGGCGGGGTAGTTTCGGGATCGCCGGAGGAGTCGCCGGAATCAAAGACCCGGCGCCGGGAGCTCATGGCGGCTGCCGCCGAGAAGCGAATGGCGGCAGGCGTGAGGGTTTCGCCGTCGCCGCCACCCACAGCCAAAGGGGCGAAGAAGGGTGGTGAAATTGGGAAGAGAGAAGAGGATTTACGTTTGAAAGGTGGGAACTTGAGTAAGGAGTTGTCTATAGAAGAAGCTAATCAGTTGTGGGTTATGGTGTTTGGGAGTGAAGTCTCAAAGGGCATTCTTGCACAATGGAGCAACCAGGGAATCAGGTTTAGCTCTGATCCTGAAACATCAATGGGCCTAGTGCAGCATGAAGGTGGCCCCTGTGGCGTTTTGGCAGCTATACAAGCTTTTGTGCTCAAATACATTCTTTTCTTCAGTAATGAGTTAAAAGATGTATCGCACATGCCACAGAATCGAGGTCTGGGTGCGTCATTTAAAAGTCAATTTGTTCCATCATACAATTTTTCTTCACTCACTGATGGAGTAAAAGTAAGAGCCCTTGTAAGAAGTATGGGTGAAATTTTATTTTCATGTGGAAGTAATAGAAGGGCTGTCATTGCAACTTTGAGCATTCCAGGGAATGACATTCAGCATCTTGAAGGAATTTCAGAGGATGAGGTTATTGCAAGATCACTTAATGGTCTTTCCATTGAATCAGCCTTGGATCTGCAGAAAGTTCTTAGAGTTGAAACATGCACGTCACTAACTACTGCATTGCAGAGGCTTGAAGCAGCTATTCCCTTACTCCAAAGTCGTATGGGGGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGGGGACTGGATTTGGTTCAAAGTGACCGGGATGATCCCAGCCTACCACTGGTTACTGCTCCTTTTGGGCATGCCTCCCAGGAAATTGTAAACCTACTGCTCTGTGGGCAGGCTGTCCCTAATGTGTTTGATGGAAGGATGGATTTAGGTGGAGGAATGTTTCTGAAAGGTATATCCCGAAATGTGGAAGTTGGATTTCTCACTTTGCTAGAATCCTTGAATTTCTGCAAGGTTGGTCAGTTTCTGAAATCCCCAAAATGGCCTATATGGGTTGTTGGGAGTGAATCCCATTACACAGTGCTGTTTGCTCTTGACCCCAGCGTTCAAAACGAGAATGAATTGGAAGGAAGGGAAACACAGATTCGCAAAGCTTTTGATGCACAAGATCAGAGTGGAGGTGGTGGTTTCATTAGCGTGGAAGGGTTCCATCAAGTCCTCAGAGAAACAAATATCAGACTTCCACCAGAGAAGCTAGAGAACCTTTGCAGTGCAGGTTTCATTGTATGGAGTGAATTTTGGCAAGTAATTTTGGATTTAGACCAAAGCTTGGGAGGTTTGAAGGATTCATCTGGATTGATGGGTAAGCAGGTATTTGATCTTTACCATTTTAATGGGATTGCTAAATCAGATCTGAATGGCAGTCAAGTAAATTCTGGGGGTGAAACTCCATTGCAAAGACCCCGGCTCACAAAATTGAGAGTTTCAGTTCCTCCAAGGTGGACGCCCGAGGAATTTATGGCAGATGTGAAAGTTTCCTCTGCTTCTGGTGCAAGTGAGTCTGCTGAGAAGGACAATGAAGTATCCAAACCAGAGCCATCTCAGCATGCACCTTTGGTGGACTGCATAAGGACACGTTGGGCCCGTGCTAGCTGCAGCTGGTCGGGGGATCCTCCTAGTATAGTCTGA 1842 0.4723 MADRGEDEDLQMAIRMSMQRGTPEPKRSKPRDAVGGVVSGSPEESPESKTRRRELMAAAAEKRMAAGVRVSPSPPPTAKGAKKGGEIGKREEDLRLKGGNLSKELSIEEANQLWVMVFGSEVSKGILAQWSNQGIRFSSDPETSMGLVQHEGGPCGVLAAIQAFVLKYILFFSNELKDVSHMPQNRGLGASFKSQFVPSYNFSSLTDGVKVRALVRSMGEILFSCGSNRRAVIATLSIPGNDIQHLEGISEDEVIARSLNGLSIESALDLQKVLRVETCTSLTTALQRLEAAIPLLQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMFLKGISRNVEVGFLTLLESLNFCKVGQFLKSPKWPIWVVGSESHYTVLFALDPSVQNENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVLRETNIRLPPEKLENLCSAGFIVWSEFWQVILDLDQSLGGLKDSSGLMGKQVFDLYHFNGIAKSDLNGSQVNSGGETPLQRPRLTKLRVSVPPRWTPEEFMADVKVSSASGASESAEKDNEVSKPEPSQHAPLVDCIRTRWARASCSWSGDPPSIV* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02604 613 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 116 427 IPR025257 -
Rops6g02604 613 SUPERFAMILY EF-hand 429 489 IPR011992 -
Rops6g02604 613 MobiDBLite consensus disorder prediction 45 59 - -
Rops6g02604 613 PANTHER UNCHARACTERIZED 44 612 IPR039785 GO:0004843|GO:0071108|GO:1990380
Rops6g02604 613 MobiDBLite consensus disorder prediction 1 93 - -
Rops6g02604 613 SMART DUF4205_3 114 483 IPR025257 -
Rops6g02604 613 MobiDBLite consensus disorder prediction 562 591 - -
Rops6g02604 613 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 19 IPR003903 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02604 K22647 - gmx:100813222 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02604 6 46826989 46842185 Rops6g02604 6 46826989 46842185 ECH