Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02561 ATGGTCAACAAACACCAAATACACACTTGTCCATTTCACACAACTACATTCCAACCACTTTCTTGCTCTGCTTCTCAGTTTCCTTTGTTTTTCAGCCCAAGAAGAGTTCTTGTTTCTTTTGATCATTCATTGAAGATGGCCATAAAGACAATTGAATTATTGAAAGGGTGTGAATCCCATGAAGAAATGATGGAAGTTCTTGCTACTGTGGCTTTGGATTTGGGGGATATGATTGATGATGTGAACACCATGCAGGTGATTCCATTGAAGGGTGCAATGACCAATGAGGTTTTCCAAGTAAATTGGCCAACCGAAAATGGTGGTGAGCTTAGAAAGGTTCTGGTTCGGTTATATGGAGAAGGTGTTGAAATTTTCTTTGACAGAGAGGAAGAAATTCGAACCTTTGAGTGCATGTCAAAACATGGTCAGGGTCCACGCCTTCTTGGCAGGTTCACCTGTGGACGAGTTGAGGAGTTTATTCATGCCAAGACTCTCTCGGCTGCTGATCTCCGGGACCCTGAAATATCTCCTTTGATAGCATCTAAGATGAGAGAGTTCCATAATCTTCATATGCCTGGTGCAAAGAAGGTTCAGATTTGGCAGAGAATGAGGAAGTGGTTTGCTGAAGCCAAGAGTTTGTGCTCTCCAAAGGAGACAAATTTTTTTGGCTTGGACAATGTGGACGAGGAAATAAATATCCTGGAGAAGAAGTTATCTGAAGGATATCAAGAGATTGGCTTTTGTCACAACGACCTACAATATGGTAACATTATGATGGATGAAGAGACAAGATCAATCACTATAATTGACTATGAATATGCCAGTTACAACCCTATTGCCTATGATCTGGCAAATCATTTCTGTGAAATGGTGGCAGATTACCATAGTGACACACCTCATGTTCTTGATTACAGTAAATATCCTGGACTTGAGGAGCGTGAAAGGTTTATCCGTACCTATCTGAGTTCTGAAGGCAATAAACCCAGCAATGCTAAAGTGAACCAGTTAGTGAATGCTGCAGAAAAGTACTCTCTTGCAAACCATCTATTCTGGGGCTTGTGGGGACTTATTTCAAGTTATGTCAATAAAATTGATTTTGATTACAAGGAGTATGCAAGGCAGAGGTTTCAGCAATACTGGATAAGGAAGCCTGCTTTATTGGACTCACCAAGCATTGTTTCCCTAGATGACACTGTGAATGGTTCATTGGCATCCTTCATGTGA 1224 0.4101 MVNKHQIHTCPFHTTTFQPLSCSASQFPLFFSPRRVLVSFDHSLKMAIKTIELLKGCESHEEMMEVLATVALDLGDMIDDVNTMQVIPLKGAMTNEVFQVNWPTENGGELRKVLVRLYGEGVEIFFDREEEIRTFECMSKHGQGPRLLGRFTCGRVEEFIHAKTLSAADLRDPEISPLIASKMREFHNLHMPGAKKVQIWQRMRKWFAEAKSLCSPKETNFFGLDNVDEEINILEKKLSEGYQEIGFCHNDLQYGNIMMDEETRSITIIDYEYASYNPIAYDLANHFCEMVADYHSDTPHVLDYSKYPGLEERERFIRTYLSSEGNKPSNAKVNQLVNAAEKYSLANHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWIRKPALLDSPSIVSLDDTVNGSLASFM* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02561 407 Coils Coil 224 244 - -
Rops6g02561 407 PANTHER CHOLINE/ETHANOALAMINE KINASE 60 388 - -
Rops6g02561 407 Gene3D Phosphorylase Kinase; domain 1 82 159 - -
Rops6g02561 407 CDD ETNK_euk 84 380 - -
Rops6g02561 407 SUPERFAMILY Protein kinase-like (PK-like) 80 385 IPR011009 -
Rops6g02561 407 Pfam Choline/ethanolamine kinase 111 311 - -
Rops6g02561 407 Gene3D - 119 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02561 Rops-Chr6 46171879 46178237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02561 46 389 Acyl Lipid Metabolism Gene Families AT1G71697 62.717 2.05e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02561 K14156 - gmx:547866 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01147 5 24020556 24025751 Rops6g02561 6 46171879 46178237 PCT