Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02526 ATGTGTAGTATGTGCCATTATTGCGGTGCAGGCTTGACGGAATCAAATGTTAACAACAAGAAACAGGGAAATGAGAGTAGTTTAAAGTTGCATGGTAAAGTTCCCATAGCACCTTGTAAATTTTGTGGAGAGAAGCTAGAATGCGAAAATGGGAAATGGCATAGTATAAGTCCGTATGCGGCACCACATATCAGTCCAACTACAGCATTGTCAAGTGCTGACAGCTGTGTCTCCACTTGCAGTGAGTTTTCTGTTGATGTGAACTCATTTGACAGGAATAGTCGAGAAGGAAGTACAGTAGAAGGTGTAATGGAAGGTCTTGCTTATAAGTTGAATGGGGAATCACAAAATGTGATGGAAAACATTTCCCAAGAGAGCAATAATGACAATGAGGGTTACACGGTGAGAGATGTGGAGATTGCACAAGGACATAGCTTTCAAGAAGCAAAATCTGATGGTTCTGAAGACCCTAACGCTTCCTCTGCTGAAGAAACTGAATATTTTTTTCCTGATGATTTGGATATCCAAACTTGGGAACCTCCTGAGCCAGAGAACCCACAGGATGATATGGACAATAATGTGACTTTTCATGATGATGATGAAGACCAGGGCATTGGGATTGCGGACTTGGGCGAGCTAACTTCTATGAGTAGTTCTAACTCTAAGGATGGATTGAGTGGGATCTGCTGTAGGTTCAAAGAGGTAAAACAAAGAGCAATGGAAGAAGTTATGAATGGGAAATTCAAGACACTTGTAGGCCAGCTTCTGAAATCTGTGGGAGTTTCCTCTTCTGATGAAGGTGATAAGAGTTGGGTGGACATAGTTACATCTTTATCTTGGGAAGCTGCTTCTTTTTTGAAGCCTGATGCTATTGGAGGTAATGCAATGAATCCTGATGGATATGTTAAAGTGAAATGCATTGCAGCTGGTTCACCCAGCCAAAGTCAACTTATCAGAGGTTTGGTCTTCAAAAAACATGCTGCTCACAAGCATATGCCAACTAAGTACAAAAACCCAAGGTTGTTACTGATCAGGGGCATGCTTGGCCATTCTATCAACGCGCTGTCCTCATTTGACTCCATGGATCAGGAGAAAGACTATCTGAAATCTAAAATGGATCTTATAGAAATATGCCATCCTAATGTTATATTAGTGGAGAAAACAGTTTCTCGTGATATACAAGAGTCAATTTTGGCAAAGGGAATGACACTAGTACTTGATATGAAGCTTCATCGACTGGAAAGAGTGGCACGTTGTACTGGTTCACCAATCCTATCATGTGATAATTTGAACAGTCAAAAGCTAAGACACTGTGATTTTATTTATTTTGAGAAGTTTGTGGAGGAACATGATGGTGCTGGTGAAGGAGGAAAGAGGCCCATCAAGACTTTGATGTTCATTGAGGGCTGTCCTACACGTTTGGGCTGTACGATTTTGCTGAAAGGAACGCACAGTGACGAACTGAAGAGGATCAAATGTGTCATGCGGTGTGCAGTTATCATGGCATATCACTTAATCCTCGAAACCTCCTTTCTTGTTGATCAGAAAGCAATGTTCTCTACCATTCCTGCTGTGAATGTAGCAGATATCTTGCCAACCAGTCAAGAATCCCGTGATTTAACATCCACTAATTCAAGCATTCCATCTCTCGAGTATTCTGCTGAAAGTGGAATAGTTAGTACTGATATTCCCATATGTAATGGACTTTATGAAAAAAGCACCAATGGTTTAAACTTGGAATCAAAAGAGTTTTCCCCATTTTCTTATGAACCATATAATCCGGCTGTCTTTTCTGGGTTCTCAGCTATTTCTTCTTCTCTGAAAAAAGTTATGGGGGACAGTTTTCCCTTTGCATCTTCTGCTCCTTATCAGTCTCTATCAGCATACTTTGGCTTCAATGGAAGGAAACCTGATGGTCAGGTCAACAAATCAATTTCTATTTTAGACTCTCCGGAGGCAGATGAAAATACCAGGATTGAAGCAGAAAATCATTCTAATGAAGGGAAGTTACTTAATGGTGGACAATCCCTGTCTTCCAATGGGAATATAAATAAAAATGATGATAATGATAGAAAAGAACTCCAAAGTAAGGATGATATCAATGCAGTGTTGGATTCTCAAAGTATTTTGGTCTTGATGTCTAGCCGGAATGCCTTAAGAGGGACTGTATGCCAGCAAAGTCATTTTTCTCATATTATGTTCTACAAGAATTTTGATATTCCGCTTGGAAAGTTTCTGCAGGATAACCTACTCAATCAGACAAGACTTTGTGACACCTGTCAAGAACTGCCAGAAGCTCACTTTTATTATTATGCTCATCACAATAAACAGCTTACTATACAAGTTAAACGATTGCCCGAGGGAAAATGTTTGCCTGGGGAGGCTGAAGGGAAAATTTGGATGTGGAGCCGTTGTGGAAAATGCAAGTCTCGTTCTACAAAAAGGGTGTTGATATCCACCACTGCCCGTAGTCTATCATTTGGAAAATTTTTAGAGCTTAGCCTTTCTCGCTATTCTTCAAGAAGAAAATTGAGTTGTGGCCATTCTCTTGATAGGGATTTTCTCTACTTCTTTGGATTGGGTCACATGGTTGCAATGTTCAGATATTCTTCTGTCACTACGTATACTGTTTCTATGCCTCCTCAAAAGCTAGAGTTCAGTGGTGCGATTAGACAAGAGTGGCTTTTGAAAGAGACCGAGAATGTTTATTCAAAAGGCATATCACTATTCGCAGAAGTTGCCCACTATTTGAAGACAATACGATTTGATGGACCAACCTTGAACCTTGGACCGATAAGAGAGTTCTCTGAGGTTGAGAATATGTTAAAGCAAGAGCGAGAAGAGTTTGAGGCAAACATCAAGAATGCTGTTGCTAAGATCGGGGATCCAGACTGGGCTTCCTTCAAACTTCTCAGTCTAAACCGATTGATGTGGGATCTTCTGATTGCATCCTGTGTATGGGATCGACGCTTGTATTCATTACGCTCACTTGATCGTTTAAGAACTGAATCTGATGTCTCTGAGAAAATTATGCCAGAGCAAAATAATTCAAAGGTGGAAGGTACGGCTGGTAGAGAAACTGGATCTATGGGTAATTTTATGGAAGATGGCGATGTGAAATTGACATCAGACACATCTGTGGAGATAAATGAACTCCCAATAAAGGAAATTCCTATTAGTGGACCTTTTCTTGAGTGCAATGAACAGGATGATCCATCTAACACTTCTGATGTCCCACAGAATGGGAAGATACAGATTGTTGATGATTTGAGATCGAAGAGATCTTCTGACCAAAATTTGAAGTCGAGTCTAGATGTTTCCACTCAGTTCTCTTCAGCAGATGGCAATCGAGTACATGAAAACTTTCCAGTTGCTTCAGATATTCAAACTAGTCGTCCAATTGCTGATTTAAAGGTATTAAGCAAGAATGCTTCACTGCATTCACCTGTTTCCAACTTGCAGGATTCTATTGCATGGTTCTGGAAACCATTTGCTGACATTCGGCAGATAGGCATAAGGGAATTCCAGAGAAGATTCTTTCCAAAATATGAGTCTGTAAGCAGCTCTATTACAGAATATCTACCCACAGCCAATCAATTAATTACCGAGGAAGGTACAAGGTTACACATCCCTCTCAAAACAGATAATCATATTGTGTCTGACTTCGAGGGTGAACCCTCAAGCATAATTGCTTGTGCACTAGCCTTGTTGAAAGATGCTTCTGAGCTGACAGAAGTTGATGAGGATGATAGAAGAGAAAGTGAAATAGCTTCAAAATCAACAGAAAGTTTGTATGGCTTGTCCTCTGGAGCTACCTTAACTTCACACTCATTTTCAAGAAGTTCTTCAGATGCAGATTCTGTGCATTCTACAGGAAGCACTTCTTCAGAAGAGTCACGAGCCTCTCGTGCTACAGAAAACCATAGCATAGAGATTGCTATGGGTTATGCAAAATCACTTGGGAGGGAAAAATATTCAGTGACTTGTCATTATGCTAAGCAGTTCCGTGAACTTAGAAATTGGTGCTGCCCATCTGAGCTTGATTATATTGCTTCTTTAAGCCGCTGTAGTAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCTTTTTTTGCAAAAACAATGGATGACAGGTTCATCATAAAGGAAATCAAGAAGACAGAACTTGAATCATTTTTGGGGTTTTCTTCTCTGTATTTCAAACATATGAGAGAGTCATTTGAGTCTGGGAGCCAAACATGTCTTGCGAAAGTCTTGGGCATATATCAGGTTACTAAAAGACACGTCAAAAGTGGAAAAGAGGTTAAACATGACCTCATGGTGATGGAAAATCTTATCTACAATCGAAACATTACCCGTCAGTATGATCTTAAAGGTGCTCTTTATGCCCGGTACAATTCTGCTGCTGATGGTGCTGAAGATGTTCTTTTGGATCAGAACTTTGTGAATGACATGAACTCCTCTCCATTATATGTCAGTCATAAAGCAAAACGTGTTCTTCAGCGGGCTGTTTGGAATGACACATCTTTTCTTAATTCAATCAATGTGATGGATTATTCCTTACTTGTTGGAGTAGACTCTCAGAAGCGTGAGCTTGTTTGTGGGATCATTGATTATCTCAGGCAGTATACGTGGGACAAGCATCTTGAGACATGGATGAAGTCTTCACTTGTCGTGCCCAAGAATGTGTTGCCAACTGTAATCTCTCCAAAAGATTACAAGAAGAGGTTCAGAAAGTTTATGTCCACGTATTTTTTGAGTGTTCCAGATCACTGGTGCTCTCAGAAATCCTATGATCCTTGCAAACTTTGTTGCTCAGGGAAAGATGATGACCCTTCTTCCCAACAAAAATCCTAG 4854 0.4028 MCSMCHYCGAGLTESNVNNKKQGNESSLKLHGKVPIAPCKFCGEKLECENGKWHSISPYAAPHISPTTALSSADSCVSTCSEFSVDVNSFDRNSREGSTVEGVMEGLAYKLNGESQNVMENISQESNNDNEGYTVRDVEIAQGHSFQEAKSDGSEDPNASSAEETEYFFPDDLDIQTWEPPEPENPQDDMDNNVTFHDDDEDQGIGIADLGELTSMSSSNSKDGLSGICCRFKEVKQRAMEEVMNGKFKTLVGQLLKSVGVSSSDEGDKSWVDIVTSLSWEAASFLKPDAIGGNAMNPDGYVKVKCIAAGSPSQSQLIRGLVFKKHAAHKHMPTKYKNPRLLLIRGMLGHSINALSSFDSMDQEKDYLKSKMDLIEICHPNVILVEKTVSRDIQESILAKGMTLVLDMKLHRLERVARCTGSPILSCDNLNSQKLRHCDFIYFEKFVEEHDGAGEGGKRPIKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVMRCAVIMAYHLILETSFLVDQKAMFSTIPAVNVADILPTSQESRDLTSTNSSIPSLEYSAESGIVSTDIPICNGLYEKSTNGLNLESKEFSPFSYEPYNPAVFSGFSAISSSLKKVMGDSFPFASSAPYQSLSAYFGFNGRKPDGQVNKSISILDSPEADENTRIEAENHSNEGKLLNGGQSLSSNGNINKNDDNDRKELQSKDDINAVLDSQSILVLMSSRNALRGTVCQQSHFSHIMFYKNFDIPLGKFLQDNLLNQTRLCDTCQELPEAHFYYYAHHNKQLTIQVKRLPEGKCLPGEAEGKIWMWSRCGKCKSRSTKRVLISTTARSLSFGKFLELSLSRYSSRRKLSCGHSLDRDFLYFFGLGHMVAMFRYSSVTTYTVSMPPQKLEFSGAIRQEWLLKETENVYSKGISLFAEVAHYLKTIRFDGPTLNLGPIREFSEVENMLKQEREEFEANIKNAVAKIGDPDWASFKLLSLNRLMWDLLIASCVWDRRLYSLRSLDRLRTESDVSEKIMPEQNNSKVEGTAGRETGSMGNFMEDGDVKLTSDTSVEINELPIKEIPISGPFLECNEQDDPSNTSDVPQNGKIQIVDDLRSKRSSDQNLKSSLDVSTQFSSADGNRVHENFPVASDIQTSRPIADLKVLSKNASLHSPVSNLQDSIAWFWKPFADIRQIGIREFQRRFFPKYESVSSSITEYLPTANQLITEEGTRLHIPLKTDNHIVSDFEGEPSSIIACALALLKDASELTEVDEDDRRESEIASKSTESLYGLSSGATLTSHSFSRSSSDADSVHSTGSTSSEESRASRATENHSIEIAMGYAKSLGREKYSVTCHYAKQFRELRNWCCPSELDYIASLSRCSNWDAKGGKSKSFFAKTMDDRFIIKEIKKTELESFLGFSSLYFKHMRESFESGSQTCLAKVLGIYQVTKRHVKSGKEVKHDLMVMENLIYNRNITRQYDLKGALYARYNSAADGAEDVLLDQNFVNDMNSSPLYVSHKAKRVLQRAVWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNVLPTVISPKDYKKRFRKFMSTYFLSVPDHWCSQKSYDPCKLCCSGKDDDPSSQQKS* 1618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02526 1617 CDD PIPKc_PIKfyve 1324 1584 IPR044769 GO:0000285
Rops6g02526 1617 MobiDBLite consensus disorder prediction 1063 1082 - -
Rops6g02526 1617 Pfam TCP-1/cpn60 chaperonin family 232 506 IPR002423 GO:0005524
Rops6g02526 1617 MobiDBLite consensus disorder prediction 662 692 - -
Rops6g02526 1617 SMART PIPK_2 1300 1585 IPR002498 GO:0016307|GO:0046488
Rops6g02526 1617 SUPERFAMILY GroEL apical domain-like 314 482 IPR027409 -
Rops6g02526 1617 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1257 1584 IPR002498 GO:0016307|GO:0046488
Rops6g02526 1617 Gene3D - 1444 1585 - -
Rops6g02526 1617 MobiDBLite consensus disorder prediction 1013 1037 - -
Rops6g02526 1617 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1445 1585 - -
Rops6g02526 1617 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D 1267 1443 - -
Rops6g02526 1617 MobiDBLite consensus disorder prediction 1067 1082 - -
Rops6g02526 1617 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 68 1596 - -
Rops6g02526 1617 Coils Coil 932 959 - -
Rops6g02526 1617 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1362 1528 IPR002498 GO:0016307|GO:0046488
Rops6g02526 1617 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1277 1443 IPR027484 -
Rops6g02526 1617 MobiDBLite consensus disorder prediction 1092 1112 - -
Rops6g02526 1617 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 313 482 - -
Rops6g02526 1617 MobiDBLite consensus disorder prediction 1278 1305 - -
Rops6g02526 1617 MobiDBLite consensus disorder prediction 1278 1300 - -
Rops6g02526 1617 Gene3D GroEL 313 482 IPR027409 -
Rops6g02526 1617 CDD Fab1_TCP 251 515 - -
Rops6g02526 1617 MobiDBLite consensus disorder prediction 668 684 - -
Rops6g02526 1617 SUPERFAMILY SAICAR synthase-like 1323 1584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02526 Rops-Chr6 45719843 45730106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02526 332 1594 Acyl Lipid Metabolism Gene Families AT1G34260 48.682 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02526 K00921 - gmx:100809696 2585.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02526 6 45719843 45730106 Rops6g02526 6 45719843 45730106 ECH