Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02524 ATGAACGTCGTCCAGCGCCTCACCGGTCCCTCTTCCGGCTACGAAACACCTCTCCGATTCGGCGATGTTTGCTTCCATAAAAAAAGCCCATCGAAGAGGGAACGAGTTCACACCGGAGACGATGACATGACAGAGTTGTTAGAAGGATTGGAAGTGGATTCAGAACTGGAAAGGAAAGCACTGATAATAGTGAATCACATCATCACCTATACCAGAAACAAAGACAACAAGAGAGTAATGCCTCTGATCACGAAGAACAATAACAACAATGCATCTTTCTCTGTTCCCACACTCTTCTTCTTGTTCACCCTCGTTTCCATTCTCTCTCTTGCATTCTTCTTCTTCTTCTCCACAACCACCACCTCACACCCTTCTCTCTCTCTTCTTCAACCTTTCACCGATTCCGGCATCGATGTCTTCGTGGCGGAGCTTCCCAGATCCCTTAACTATGGTCTCCTCAACCGCTATTGGTCCTTCGAGGACGATTCCCGACTCGGCAGCGACTCAGATAACGAGATTCGATCGAGCAATTTGGGAAAAACCCTAGAATCCCCACCGTACCCTGAGAACCCATTGATCAAACAGTACAGCGCGGAGTACTGGATCATGGGGGATCTGATGACACCTCCCAAATTGCGAACTGGGTCATTCGCAAAAAGGGTTTTTGATGCACGTGACGCTGACGTGGTCTTTGTGCCCTTCTTCGCCACTCTCAGTGCTGAAATGCAACTGGGTATGGCGAAAAGTGCGTTTAGGAAGAAGGTTGGGAACGAGGATTACCAGAGACAAAGGGAGGTCATGGATTCTCTGAAAAAAACCCAAGCTTGGAAACGTTCTGGTGGCAGAGACCACGTTTTTGTGCTCACTGACCCAGTTGCAATGTGGCATGTTAAAGACGAGATTGCCCCAGCTATTCTCCTTGTTGTGGATTTTGGTGGTTGGTACAGACTTGACCCAAAATCATCCAACTGTAGCTCATCTGATGAAATGATTCAACACACCCAAGTTTCTGTACTTAAAGATGTGATTGTGCCATACACTCATCTACTTCCCAGTTTGCACTTGTCAGAGAACAAGGAGCGCCACCACCTTCTTTATTTTAAAGGAGCTAAACATAGGCACCGGGGAGGCCTAGTTAGAGAGAAGTTATGGGATCTATTGAATAATGAGCCAGGTGTTATAATGGAGGAAGGCTTCCCTAATGCAACAGGACGAGAGCAATCAATAAGAGGGATGAGAACATCAGAGTTTTGCCTACATCCGGCTGGGGATACACCCACTTCATGCCGACTTTTTGATGCCATTCAGAGTCTTTGTATACCTGTTATTGTCAGTGACAACATTGAACTCCCGTTTGAAGGTATGGTGGATTATTCAGAATTTTCCGTTTTCGTGGCAGTTGGTGATGCACTGAGACCTAGCTGGCTAGTCAATCATCTTCAAAGCTTTTCAAAAGAACAGAAAGACAGGTTACGCCAAAACATGGCTCGGGTACAGCCCATGTTTGTCTATGATAGTGGTCATCCAGGTGGTATTGGACCTATACCTTTGGATGGTGCAGTGAATCATATATGGAAGAAAGTTCACCAAAAATTGCCAGCGATAAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCTGGTGTGTCAGTTCCACGTAGATGTCATTGTACTTGA 1677 0.4597 MNVVQRLTGPSSGYETPLRFGDVCFHKKSPSKRERVHTGDDDMTELLEGLEVDSELERKALIIVNHIITYTRNKDNKRVMPLITKNNNNNASFSVPTLFFLFTLVSILSLAFFFFFSTTTTSHPSLSLLQPFTDSGIDVFVAELPRSLNYGLLNRYWSFEDDSRLGSDSDNEIRSSNLGKTLESPPYPENPLIKQYSAEYWIMGDLMTPPKLRTGSFAKRVFDARDADVVFVPFFATLSAEMQLGMAKSAFRKKVGNEDYQRQREVMDSLKKTQAWKRSGGRDHVFVLTDPVAMWHVKDEIAPAILLVVDFGGWYRLDPKSSNCSSSDEMIQHTQVSVLKDVIVPYTHLLPSLHLSENKERHHLLYFKGAKHRHRGGLVREKLWDLLNNEPGVIMEEGFPNATGREQSIRGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYSEFSVFVAVGDALRPSWLVNHLQSFSKEQKDRLRQNMARVQPMFVYDSGHPGGIGPIPLDGAVNHIWKKVHQKLPAIKEAIIREKRKPPGVSVPRRCHCT* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02524 558 Pfam Exostosin family 135 479 IPR040911 -
Rops6g02524 558 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 135 525 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02524 Rops-Chr6 45714515 45716544 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02524 - - adu:107467786 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02524 6 45714515 45716544 Rops6g02524 6 45714515 45716544 ECH