Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02513 ATGAGGTTTTTTGTGGTTTTTGGAGTTCTGTTGTTGATCCAGTTTTGCCGTGCTGAACCATTCTCAGTGGATGGGAAGGTGTTGGTGCTTGACGAATCCAACTTCGATTCCGCCATATCTTCCTTCGATCACATCTTGGTTGACTTTTACGCTCCTTGGTGTGGCCACTGCAAGCGTCTCTCTCCCGAGTTGGATGCAGCGTCACCTGTACTTGCAGCCTTAAAGGAACCCATAGTCATAGCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCAAAAAAATTTGATGTTGATGCGTATCCAACCATTTTGCTGTTTAATCATGGTGTACCCACAGAATACCGTGGACCAAGGAAAGCAGATTTACTTGTTCGTTATCTGAAGAAATTTGCTGCTACTGACGTTTCCATACTTGACTCAGATTCTGCTGTGAATAACTTTGTTGAAGAAGCTGGCACTTTTTTTCCAATATATATAGGATTTGGGTTGAACAATTCAGTAATAGAGAAGTTTGGCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATCTCATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCGCTTAATCCACTATACAATGAGCGGAGCACATTCTATGGCCCCTTTGAAGCAGAGGAATTTTTGGAAGATTTTGTTAAACAAAACCTGATTCCTTTGGTTGTGCCTGTTTCCTATGACACACTTAAGTTGATGAAAGCTGATGGTAGGAAAATAGTCCTGACACTTGTGGAGGATGAAGATGAAGAAAGTTCAAAGGAACTGATTAAGTTATTGAAGGCTGCTGCATCTGCAAATCGCGACTTAATATTTGGTTATGTTGGAGTTAATCAGCTGGAAGAATTTGCTGAAAAATTCGATATCGGGACTAAACTACCAAAAATGGTCATTTGGAATAAAACTGATGATTACCTTACAGTTGTTGGTTCAGAAAGCATTGAGGGGGAGGATCAGGCAACTCAAATCACTAAATTTCTTGAAGGATACAGGGAAGGAAGAACCATTCAGAAAACATTTAGTGGGCCTTCACTGATGCGATTTATCCATCGATCTTTGGGCGTTAAAATGGCATACATCTTTATTTTTGTGGTTGCAGTATTGATGCTTATTCAGAGCTTTAGTAAAGGAGGTGATGAACACCATGCAGTTCCAAATCAAGATCAGGTTCATCAAGCAAGCAGTTCTGTTTCTGAAGCTGAAAGCAAAGAGTATAAACCAGGAGACAAGGAAGACTAA 1287 0.4009 MRFFVVFGVLLLIQFCRAEPFSVDGKVLVLDESNFDSAISSFDHILVDFYAPWCGHCKRLSPELDAASPVLAALKEPIVIAKVDADKHTRLAKKFDVDAYPTILLFNHGVPTEYRGPRKADLLVRYLKKFAATDVSILDSDSAVNNFVEEAGTFFPIYIGFGLNNSVIEKFGIKYKKNAWFSVAKDFSEDLMVLYDFDKIPALVSLNPLYNERSTFYGPFEAEEFLEDFVKQNLIPLVVPVSYDTLKLMKADGRKIVLTLVEDEDEESSKELIKLLKAAASANRDLIFGYVGVNQLEEFAEKFDIGTKLPKMVIWNKTDDYLTVVGSESIEGEDQATQITKFLEGYREGRTIQKTFSGPSLMRFIHRSLGVKMAYIFIFVVAVLMLIQSFSKGGDEHHAVPNQDQVHQASSSVSEAESKEYKPGDKED* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02513 428 Pfam Thioredoxin 27 129 IPR013766 -
Rops6g02513 428 ProSitePatterns Thioredoxin family active site. 46 64 IPR017937 -
Rops6g02513 428 MobiDBLite consensus disorder prediction 403 417 - -
Rops6g02513 428 FunFam Protein disulfide-isomerase 5-2 15 131 - -
Rops6g02513 428 SUPERFAMILY Thioredoxin-like 19 130 IPR036249 -
Rops6g02513 428 CDD PDI_a_family 28 127 - -
Rops6g02513 428 Pfam Thioredoxin-like domain 187 326 - -
Rops6g02513 428 MobiDBLite consensus disorder prediction 397 428 - -
Rops6g02513 428 SUPERFAMILY Thioredoxin-like 233 356 IPR036249 -
Rops6g02513 428 Gene3D Glutaredoxin 223 360 - -
Rops6g02513 428 Gene3D Glutaredoxin 18 140 - -
Rops6g02513 428 ProSiteProfiles Thioredoxin domain profile. 9 132 IPR013766 -
Rops6g02513 428 PRINTS Thioredoxin family signature 45 53 - -
Rops6g02513 428 PRINTS Thioredoxin family signature 53 62 - -
Rops6g02513 428 PRINTS Thioredoxin family signature 96 107 - -
Rops6g02513 428 PANTHER PROTEIN DISULFIDE ISOMERASE 9 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02513 Rops-Chr6 45568478 45576401 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02513 K09580 - gmx:100791778 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02513 6 45568478 45576401 Rops6g02513 6 45568478 45576401 ECH