Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02489 ATGGGTGGTTCAATTTTCACTCACTTCCTAGTTTCGTCTTCTCCTTCTCTTTCCACTCTCTTCCCCTCCCAATTTCCCACCAAACCCATTCATGAATTTGCTCTCTCCACCCTTATCTGCAAGCAATTCCCTTCCAAACTTACTGCTACTTCATGGACTTCCCAACCTGGTTTCTCATGCTCTTTAAAAAAGATGAAAGCCTTGGGAATTCAGCAAACAGGATCCACTCTACATGGAGACAACCTTCATGCAATGAAGAGCAGCAGGACCGTGCTTCAGGTGTTTCAAAGGGAAATGCCAACGGAATCCCTTAATACCCTCATCACAAAACAATCTGAGATGAATGACTTTACAACCCAGGATTTTGGAGATGGGGGAAGCTCATCCAAATGGGTTTCAGCATTCTTGTTTGGACAAACTATATCAGTGATTTATCCTGATGTTTCATATGCAAGCAGCTCAGTAAAGATAAATGAGATATATGAGATTGGAGAATTGTTTGATTTAAGCATCCAACTATTATACTTGGTGCTGTTGTTGAGTTTGTTAGGGACTGGGACTTACTATGTGATTCGCCAAATTCTGGTCCGCAGAGAACTTGACCTTTCTGCCAAAGAGTTGCAGGAGCAAGTAAGAAGTGGTGATGCAAGTGCAACCGGGCTTTTTGAACTCGGAGCAGTGATGCTGCGGAGGAAATTTTACCCAGCTGCTACGAAGTACTTGCTTCAAGCAATTGAGAAATGGGATGGAGATAATCAGGATCTTGCCCAGGTTTACAATGCTCTTGGTGTCAGCTATGTCCGTGATGGGAAGATTGACAAGGGAATTGCTCAGTTTGAGACAGCTGTCAAGCTTCAACCAGGTTATGTCACAGCATGGAACAATCTTGGTGATGCTTATGAGAGTAAAAAAGAATATAAGGCTGCTCTTAAGGCATTTGAAGAAGTGCTACTATTTGATCCCAACAACCAGGTTGCTCGGCCCAGGAGAGATGCTTTGAGGGATCTTGTTGGAATGTACAAAGGAGTTCCTGTTGAATTTAAAGAGAAAAAATGA 1056 0.428 MGGSIFTHFLVSSSPSLSTLFPSQFPTKPIHEFALSTLICKQFPSKLTATSWTSQPGFSCSLKKMKALGIQQTGSTLHGDNLHAMKSSRTVLQVFQREMPTESLNTLITKQSEMNDFTTQDFGDGGSSSKWVSAFLFGQTISVIYPDVSYASSSVKINEIYEIGELFDLSIQLLYLVLLLSLLGTGTYYVIRQILVRRELDLSAKELQEQVRSGDASATGLFELGAVMLRRKFYPAATKYLLQAIEKWDGDNQDLAQVYNALGVSYVRDGKIDKGIAQFETAVKLQPGYVTAWNNLGDAYESKKEYKAALKAFEEVLLFDPNNQVARPRRDALRDLVGMYKGVPVEFKEKK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02489 351 ProSiteProfiles TPR repeat profile. 290 323 IPR019734 GO:0005515
Rops6g02489 351 Pfam Tetratricopeptide repeat 261 320 - -
Rops6g02489 351 ProSiteProfiles TPR repeat region circular profile. 290 323 - -
Rops6g02489 351 PANTHER LD24721P 218 326 IPR047150 -
Rops6g02489 351 SMART tpr_5 218 251 IPR019734 GO:0005515
Rops6g02489 351 SMART tpr_5 256 289 IPR019734 GO:0005515
Rops6g02489 351 SMART tpr_5 290 323 IPR019734 GO:0005515
Rops6g02489 351 Gene3D Tetratricopeptide repeat domain 192 340 IPR011990 GO:0005515
Rops6g02489 351 SUPERFAMILY TPR-like 216 327 IPR011990 GO:0005515
Rops6g02489 351 ProSiteProfiles TPR repeat profile. 256 289 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02489 - - ahf:112712552 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02489 6 45272127 45276272 Rops6g02489 6 45272127 45276272 ECH