Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02487 ATGGCTGCCATTGCCATGACAGATAAGAAGATCAACGACCCAGAAGTAGGAGAGTCTAGAATCCCAGTCTTGACAGTTTTCAAGAACAATGCAATCATCAAGAACATCTTCATTATCCTTAACAAGAACGAGAACACCGTTGTTGTTGGGAGACACCCAGATTGTAACATCGTCCTCACGCACCCCAGCATCAGCCGCTTCCATCTCAAGATTTGCTTCACTCCCTCTTCAGGGACCCTTTCCCTATTGGATTTATCTTCTGTGCATGGTACGTGGGTGTGTGGAAGGAAGCTTGAGCCAGGTGTAAGTGTGGACCTGAAAGAAGGTGACACTTTCACAGTTGGAGTTTCCACTAGGCTTTATCGTCTGCGTTGGGTCTCTGAATTGGATGTGGTTGAACAACAACAACAGGATGTGAGACCGGATGAGAATTTGGAACACATTGTGGTGGAACAAGAGATTCCCATGCAGGAAGACATGGTTTCTTTTTGTTGTGATGAAGAAAGGAAGGGCCCTTCTAATGAAGTAAAATTTGGAGTTCTGGATGGCTCCTTTGGAACTGAAACATCATATTCTGCTACAAATTATGATGGTAAAAATAAATTGTATGGCTGTCAAAACCATGTCCTATTTCCACCTTATGTACAATCTGTTGATGAAGTTGATAACACAGAGAAAATTGAAGCTTGCCCTTATGTAGAGATGCCCGAAGAAACTAATTTGCTTTGCACATTGAGAGAATATTTGACACAGAACATATGTCTGCCAGTTGTGGAAGCAGTCCAGGGCACCAAAATGGAGCAATTTCAAGGCCAGCCCGATACTTTTATTGCACAACCACCTTCCTTGGATAAGCATCAGTCCAGCTTGCTTACAAATATTGATCCAGCTTCCTTTGATGAAAAAGATGCTGAATCAGTGGCTGTAATACCTAAAGAATCTGAATTTGGATGCACATTTAAAGATAATGACAAGATTGAAGATATCTTGCCTACTGGAGAAAGAATTTTCAATTCTGAGAACTCGTGTTTGCTTGTTGATAAAGATATTCATGATTGTAAATTTCATCAAATCAAAGTTGTTGAGGAAGTTTCTGTGGATTCACTATCAGATGGAGAAAAACAAGACAAATTTTGTGAAGAGTATAAGTCAAAGTTGCACGACCTGGAGGCTAAATCTTGCTGTGAGCAAGGGTACTCACTAGATGAAATTGAAGATATAGGAAACAAATGCATTAAAAATATGGATCCTGCATCTTTTGGTGAAAGAGGTGTAGCTGCAGTGACTGTATTACCTAAAGAATATGAATTAGGATGCACGTCGAGAGATAATGACAGGATTGAAGAAGTTGATGTGGATTCAATATCTGATGGAGAAAAACAAAATAAGTGTGACAAGGAGTTGAAGTCAAAGTCGCAGGCATACCTGAATGCTAACTCACTGCATGATATAGTTGATACTGGAAAATCATTCTGGGTAGAATCATTAAATTTGTCAATGCATCAGGAAGCTGATTTAATGATTACAAACAAGGAAGAGAACCAGACCCAGCAATCTCTCATTGATGTGGCAGGATGCTTTGAGGTGGAAATCCTTGAAAGCCATGTAGAAGCAACAACGAAGGCTAAATCTTGTCATGAACAAGGACACTCACCAGATGTAGTAGTTCAAGACATCGGAAACAAGTGCACAGATAATACCTGCCCCATATCACTTCAAGTAGAATCAGTAAATTCTTCAGTGCCTAAGGAATCTGTTTTGAACATGACTGACAAGATTGAGAACCAGACCCCGCGATCTCTCATTGCCGTGTCTGGATGCTCCGAGATGGAAATCTTTGAAAGCCATGTAGAAGGAGCAACAGAGAAAAGTTCAACCTTTGGTAATATTTTGTCAAGAAGAGGTAAGGCTGCCAGTGCTCCTCAGGTTCGAACCAGAAAGAGTAGACTTATGAGCACATCTAATGTTGACACTAAAATTGAAATGAGTAATGTGAAGGATAACATAAATAAATCAATGCCAAAGGATCTTTTCTCTGTCTTGGATGAAGCAGAAATATTCACTCCAAATAAGGAAAACTCAAGCCCAAATGCCTTTCAGTTGCGGTTTATAAGAGAGAGAGGTAAGCTAGAAGAAATTAAACATTCCAAGTCTCAAAGGTCACATGATTTGAAGGCTAATTTTAGTCCCAACATCTATCCAGCTAAAAGCATAAGCGCCATTTCAAACAAAGAGAACCAAACTCCAAAACTAGCCCAAGAATGGAAGTCACGAAGAAAGCCTCTGGAGAGTCATATCAACTTGGCTCATGAACAAGATATAATGGATTTAAAAAAGAACAGAGTGCAAAAGGTACCCTTCCAATCACTAATGAACTCTGGAGGCAATCACAGAACAAGGACTTCTGATCCTGTTTCTCCTGCAAAAACCATTGATAATGATGCCAGTGATTGTGGACAGATTTTAGACAAGTGCACTCAACATTCTCATATTAGTGGGGAACAAAAGAGGAGGTGGGACATGGTTGTAGACACTGCTTCTCTTCTGAACAAGGAGTCAAGGAAAGCTTTGCAGCGTCTACAAGGTCTCAAGGGGACTCGTTTAATCATTCCAAGATTGGTCATAAGGGATCTGAGCAGTATGAAGCAGCAATTTAGAATTTTTAGAAGTACTTCAGAGGCTTCTTTGGCATTGGAATGGATTGAAGAATGCTTGGAGAACCCAACGTGGTGGATTCATATCCAAAGCTCAATGGAGGAGGAATGCAGGTTGATTGCTCCAACCCTTCCTGCTTCACCTCAGACTCAGTTTATTGGAGAGAGTTGGTCTTTTCCTGGTCCAGAGAGCTCAAAGGAATTTGCTTCAGAAACGGTTGAAGATCACATCCTTGAATGTGCTCTTCAATATAGAAGTGAGGAGAATGTTGGACAAATAGTCCTGCTTAGTGATGATGTCACTTTGAAAATCAAATCCATGGCAAAGGGGTTGCAATGTGAGACAGTGCAGGAATTTCGCCAGAGTTTAGTGAACCCCTTCTCTGAGAGGTTCATGTGGACAAATAGCACTCCTCGAGGATTGACTTGGTCTTGCAAAGATGATGTGGTTTTACGGGAGAAATATTGTGGTTTGCCATCAAAGGCTGGTTTGAAGCTCATCGCTGAACAGTTTTTGTACTTGCATGTTTAA 3186 0.4074 MAAIAMTDKKINDPEVGESRIPVLTVFKNNAIIKNIFIILNKNENTVVVGRHPDCNIVLTHPSISRFHLKICFTPSSGTLSLLDLSSVHGTWVCGRKLEPGVSVDLKEGDTFTVGVSTRLYRLRWVSELDVVEQQQQDVRPDENLEHIVVEQEIPMQEDMVSFCCDEERKGPSNEVKFGVLDGSFGTETSYSATNYDGKNKLYGCQNHVLFPPYVQSVDEVDNTEKIEACPYVEMPEETNLLCTLREYLTQNICLPVVEAVQGTKMEQFQGQPDTFIAQPPSLDKHQSSLLTNIDPASFDEKDAESVAVIPKESEFGCTFKDNDKIEDILPTGERIFNSENSCLLVDKDIHDCKFHQIKVVEEVSVDSLSDGEKQDKFCEEYKSKLHDLEAKSCCEQGYSLDEIEDIGNKCIKNMDPASFGERGVAAVTVLPKEYELGCTSRDNDRIEEVDVDSISDGEKQNKCDKELKSKSQAYLNANSLHDIVDTGKSFWVESLNLSMHQEADLMITNKEENQTQQSLIDVAGCFEVEILESHVEATTKAKSCHEQGHSPDVVVQDIGNKCTDNTCPISLQVESVNSSVPKESVLNMTDKIENQTPRSLIAVSGCSEMEIFESHVEGATEKSSTFGNILSRRGKAASAPQVRTRKSRLMSTSNVDTKIEMSNVKDNINKSMPKDLFSVLDEAEIFTPNKENSSPNAFQLRFIRERGKLEEIKHSKSQRSHDLKANFSPNIYPAKSISAISNKENQTPKLAQEWKSRRKPLESHINLAHEQDIMDLKKNRVQKVPFQSLMNSGGNHRTRTSDPVSPAKTIDNDASDCGQILDKCTQHSHISGEQKRRWDMVVDTASLLNKESRKALQRLQGLKGTRLIIPRLVIRDLSSMKQQFRIFRSTSEASLALEWIEECLENPTWWIHIQSSMEEECRLIAPTLPASPQTQFIGESWSFPGPESSKEFASETVEDHILECALQYRSEENVGQIVLLSDDVTLKIKSMAKGLQCETVQEFRQSLVNPFSERFMWTNSTPRGLTWSCKDDVVLREKYCGLPSKAGLKLIAEQFLYLHV* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02487 1061 CDD PIN_Smg5-6-like 842 1007 - -
Rops6g02487 1061 PANTHER TRANSMEMBRANE PROTEIN 18 15 1053 - -
Rops6g02487 1061 Gene3D - 7 127 - -
Rops6g02487 1061 Pfam FHA domain 47 115 IPR000253 GO:0005515
Rops6g02487 1061 SUPERFAMILY SMAD/FHA domain 22 130 IPR008984 GO:0005515
Rops6g02487 1061 SMART FHA_2 46 98 IPR000253 GO:0005515
Rops6g02487 1061 Pfam PIN domain 841 1001 IPR002716 -
Rops6g02487 1061 Gene3D - 835 1009 - -
Rops6g02487 1061 ProSiteProfiles Forkhead-associated (FHA) domain profile. 47 98 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02487 Rops-Chr6 45260962 45264974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02487 - - var:108324357 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02487 6 45260962 45264974 Rops6g02487 6 45260962 45264974 ECH