Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02198 ATGGCTGAAACTATGAAGAATCAACCGTGGTGGCTTGACAGCCCCAACACCACTAGAAGATCCCCATGGCTTCAATCCACACTCACTGAGCTAAACGAGAAGACAAAGGCAATGTTAAAATTGATTGAAGAAGATGCAGATTCCTTTGCTCAACGTGCAGAGATGTATTACAAGAAGAGACCAGAGCTTGTGAGAATGGTTGAAGATTTCTATAGGACACACCGTTCATTAGCTGAACGGTATGATCAAGTCAAACCCGACAGTGGTAATCGCCTGCTGAAGACAGGGGGATCCCCTTTTGCTTCATTCAAGTCTCATCAATCGGAGAAGTTGATGAGTTTTGCAGATAATGGTTATGATAGCTATTCTGAGAATTGTGATGTAGAGGAGACAGGGGAATCTGAAGTTGATGATCCTGAGCAAGAAGTGGAAGAGGGTACCAAATTTGATAGCTATAAAGAAAAGAAGGAAGTTCAGTTTGTGGCTGCAAATGATGAAGTGATGAGGCTGAGGAAAGAAACTGAGAGACCTAGTGAAGATAGCAAGGCTCATAAGGATCAAATCAAGCAGAAATATAACATTCATGAAGAAGTAATGGCATTGAAGGAAGAAATAGAACTACTAAGAAAAGAGAATCAAGCGCAGAAGGATGAACTCAAGCAGAAAGATACCATTTGTGACCAAGTAATGGTGTTAAGAGAGGAGATAGAAAGAGTGAGAGAAGAGAATAGGGCACAGAAGGATTATCTCAAGCAGAAAGACGAGGAGAAAATAGAGGTGATAAGACACCTAAGTTTAGCAATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAACTTCATAGCTAAAATGTGTACCAAGAAATGGAAGAACCCATTTGAGTTCACTGGATCATTATGGGGGAAGTTTTTCAATGGGATTCCAAGGAATCAGCCTAGTATTGTAGCTCTCTAG 957 0.4086 MAETMKNQPWWLDSPNTTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPELVRMVEDFYRTHRSLAERYDQVKPDSGNRLLKTGGSPFASFKSHQSEKLMSFADNGYDSYSENCDVEETGESEVDDPEQEVEEGTKFDSYKEKKEVQFVAANDEVMRLRKETERPSEDSKAHKDQIKQKYNIHEEVMALKEEIELLRKENQAQKDELKQKDTICDQVMVLREEIERVREENRAQKDYLKQKDEEKIEVIRHLSLAIDVLKQENVKMRNFIAKMCTKKWKNPFEFTGSLWGKFFNGIPRNQPSIVAL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02198 318 Coils Coil 191 256 - -
Rops6g02198 318 Coils Coil 153 173 - -
Rops6g02198 318 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 8 88 IPR011684 GO:0003779
Rops6g02198 318 Pfam KIP1-like protein 10 82 IPR011684 GO:0003779
Rops6g02198 318 MobiDBLite consensus disorder prediction 129 148 - -
Rops6g02198 318 MobiDBLite consensus disorder prediction 129 144 - -
Rops6g02198 318 PANTHER PROTEIN NETWORKED 4A 2 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02198 Rops-Chr6 40434476 40437042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02198 - - lja:Lj5g3v1669350.2 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02198 6 40434476 40437042 Rops6g02198 6 40434476 40437042 ECH
Rops8g03631 8 76411804 76414092 Rops6g02198 6 40434476 40437042 PCT