Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02131 ATGATGAGTTCAATTAGATTTTTTTTCTTGATCCTGGTAGTGTCTCTGACAGTATCATGCGCTTTAAGCGAACCAAACAAGTTATCAGCGTACGATGTTCTTCAGGAGTATGGGTTCCCAGTGGGTCTTCTTCCCAAAGGTGCCCTAGGGTATGCTCTTAACAGAGAGACAGGGGAGTTTGCAGTGTATTTTGATGGAAGCTGTAGCTTCACCATAGAGGGTTACACGCTCAAATACAAGCCAACCATCACGGGAGTGATTACCCAAGGCAGGCTCTACAAGCTGAAGGGTGTCACTGTCAAGATTGTGCTCTTGTGGCTAGACATCATCGAGGTTACTCTTCGTGGTAATAATCTAGATTTCTCTGTGGGTATCGCTTCTGCGAATTTTGGGGTGGATAACTTCCTTGAGAGTCCCCAGTGTGGATGTGGATTCGATTGCAACAATCTCCCCTTAAACGGTGATGTTTCTTCAATTTAG 480 0.45 MMSSIRFFFLILVVSLTVSCALSEPNKLSAYDVLQEYGFPVGLLPKGALGYALNRETGEFAVYFDGSCSFTIEGYTLKYKPTITGVITQGRLYKLKGVTVKIVLLWLDIIEVTLRGNNLDFSVGIASANFGVDNFLESPQCGCGFDCNNLPLNGDVSSI* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02131 159 PANTHER T31J12.3 PROTEIN-RELATED 17 142 IPR007493 -
Rops6g02131 159 Pfam Protein of unknown function, DUF538 30 135 IPR007493 -
Rops6g02131 159 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Rops6g02131 159 SUPERFAMILY At5g01610-like 5 147 IPR036758 -
Rops6g02131 159 Gene3D - 15 138 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02131 Rops-Chr6 39609332 39610115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02131 - - gmx:100500182 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02131 6 39609332 39610115 Rops6g02131 6 39609332 39610115 ECH
Rops8g03688 8 77151551 77153217 Rops6g02131 6 39609332 39610115 ECH
Rops8g03688 8 77151551 77153217 Rops6g02131 6 39609332 39610115 PCT