Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02103 ATGACAGGGGAGATAGGTGATGCTGTAGAAGAAGAAGAAGAAGAAGGAAGAAGACCTCTTCTTGATTCCTCAATTCTAATTCCCCATCAAAATGGAGAAGAAACCATCTTTCCTTTGCCTTCTGATCACACTGATAATAATAAACCTTCACCATCTACTTCTGTTCCCACTCACCGTCTTGCTTCTCTCGATGTCTTCCGCGGCCTCACTGTTGCGTTGATGATTTTAGTTGATGATGTGGGAAGAGCTTTCCCATCATTGAATCATTCTCCATGGTTTGGGGTGACACTTGCTGATTTCGTACTGCCGTTTTTCCTCTTTGGGGTCGGCGTTTCCATCGGTCTTGTATTCAAGAAAGTTTCTAGCAAACCAAATGCCACCAAAAAAGTCATATTGAGGACGATTAAGCTTTTCCTTTTGGGGCTGTTACTACAAGGTGGGTATTTCCATGGGCGCCACAATTTAACTTATGGACTTGATTTGAGCAAGATACGCTGGCTTGGTGTACTTCAGAGGATATCTATTGGATATTTCTTGGCCTCAATATCAGAGATTTGGCTTGTGAACAACAATATTTTGGTCGACTCGCTAGCAGCTTTTGCGAGAAAATACTCCATTCAGTGGATGTTTTCTATCGTACTTAGCTTGGTGTACCTTTGCTTGCTCTACAGCCTCTATGTTCCAAATTGGAAGTTCAAACATTCTAACATGCTTTGGTCTGGCCGTGTATCAATTATTCAAAATGTTCATTGTGAAGTGAGGGGCAGTCTTGAACCTCCTTGTAATGCTGTGGGATTCATTGATAGATTAATTCTTGGTGAAAATCATATATACCAGCGTCCTGTGTACAGAAGAACAAAGGAGTGCAGTGTTAATTCTCCTGATTATGGACCCTTGCCTCCAGATGCACCTGGATGGTGCTTTGCACCGTTTGACCCAGAGGGTATTTTGAGTTCATTGATGGCTTCCATTACATGTTTCGTGGGATTGCAATTTGGGCACATACTTATACTTTTTCAGGGCCACAAGCAGAGGGTACTTCTGTGGTCTGTGTTTTCCTTCTCCTTATTGCTAATAGGATACATTCTGGAGATTTTAGGAATTCCTTTGTCAAAAGCACTGTACACATTAAGCTACATGTGCATTTCTGCAGGGGCATCAGGCTTGGTCTTGACTGCTATCTATTATATTGTTGACATAGAACATCTCAGAAAGCCTACAGTTTTACTACAATGGATGGGAATGAATGCTCTTATTGTATATGCATTGGCTGCTTGTGACATTTTCCCAGCAGTTATCCAGGGTTTCTATTGGCGTTCTCCTGAAAATAACTTGGTTGACGCCAGTGAAGCTTTAATACAGAGCATATTTCATTCCGAGAAGTGGGGTACACTGGCCTTTGTAATAGTTGAGATTTTATTCTGGGGTCTTTTTGCTGGTTTCCTCCACAAGAAAGGGATATTTATAAAATTGTAA 1476 0.414 MTGEIGDAVEEEEEEGRRPLLDSSILIPHQNGEETIFPLPSDHTDNNKPSPSTSVPTHRLASLDVFRGLTVALMILVDDVGRAFPSLNHSPWFGVTLADFVLPFFLFGVGVSIGLVFKKVSSKPNATKKVILRTIKLFLLGLLLQGGYFHGRHNLTYGLDLSKIRWLGVLQRISIGYFLASISEIWLVNNNILVDSLAAFARKYSIQWMFSIVLSLVYLCLLYSLYVPNWKFKHSNMLWSGRVSIIQNVHCEVRGSLEPPCNAVGFIDRLILGENHIYQRPVYRRTKECSVNSPDYGPLPPDAPGWCFAPFDPEGILSSLMASITCFVGLQFGHILILFQGHKQRVLLWSVFSFSLLLIGYILEILGIPLSKALYTLSYMCISAGASGLVLTAIYYIVDIEHLRKPTVLLQWMGMNALIVYALAACDIFPAVIQGFYWRSPENNLVDASEALIQSIFHSEKWGTLAFVIVEILFWGLFAGFLHKKGIFIKL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02103 491 PANTHER LD22376P 48 477 - -
Rops6g02103 491 MobiDBLite consensus disorder prediction 40 56 - -
Rops6g02103 491 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 59 209 IPR012429 -
Rops6g02103 491 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02103 Rops-Chr6 39199480 39209610 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02103 K10532 - gmx:100802361 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02103 6 39199480 39209610 Rops6g02103 6 39199480 39209610 ECH
Rops8g03366 8 72502938 72508694 Rops6g02103 6 39199480 39209610 PCT