Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02080 ATGGGAGTAGATGAAGTACCACTGGACGACAAAGCGAAGAGGATGAGAGATCTGCTATCGAGTTTCTACTCTCCTGACCCTTCCAACACTGACAACACCTCCTCCAAACACGCCTCTCTCGATGACATTAACTCCACTTCCTTCGATCCCGATTATTACATGAACATCCTGGTATATAAGTCCAATTTGGAAGGGCTACTCCAGCAGCATGTTGAAATGGCAGCTGAAATTAAGAATCTCGACACTGACTTGCAAATGCTTGTCTACGAGAATTACAACAAGTTCATCAGCGCTACTGATACTATCAAGAGGATGAAAAGTAACATTTCAGGGATGGAAACAAATATGGAACAGCTTCTTGAGAAGATAATGTCTGTGCAGTCCAGGAGTGACGGTGTTAACACTTCTCTGTTTGACAAAAGGGAGCATATTGAGAAATTGCATCGGACTTGCAATCTTCTTCGTAAAGTTCAGTTCATATATGATCTACCTGATAGGCTTGACAAGTGCATCAAATCAGAGGCCTATGCAGATGCAGTCAGGTTTTACACAGGAGCACTGCCAATTTTTAAGGCATATGGAGATTCCTCATTCAAGGATTGTAAGCAAGCATCCGAAGAAGCATTAGCTGTCATAGTAAAAAACTTGCAGGAGAAGCTATTTTCAGATTCTGAATCAATACATGTTAGAGCGGAGGCTGCAGTGCTCCTTAAGCAGTTGGATTTTCCGGTGAACAATTTGAAGGCAAAGTTACTAGAGAAGCTAGAACAATCTGTTACAGATATTCAGCTGAACCCTGAAGAAATAAACAATGCTTCAGGGGACCTTTCTCCTTCAGTGTCTGCTCATGAGGCAGCCATTCATGAATTTGTGGAGGCGGTTCGTGCTTTTCGAGTAATATTTCCTGATTCAGAAGAGCAGTTGATCAAACTTGCTCAGGACTTGGTTACTAAGAACTTTGTAATTACTGAGGAATATGTAAAGACACGGATTTGCCCAGAAGATCTACTTGGTGTTCTTGGAGTTATCTGGAATGATGTACTCCTGATAGATGAAGTCTTACAGGAAGCGGCTCTCTCTAACCATTCTCTTGAGGCTGTGAAGAATGTTGTCAAGTTGTATGTTAGAAGTGCATTTTCTCATCTTCTGCAAGATATCTCTGATGCCCTCTTACAAGTCCTGAAAAAGGATGGAGCAGAGCAGTACTCTCTCGAAGTTGTATTTGATGCTAGCACAAAAGCAGTTCTTCAAGGAGGCATGAATGTCTTGCTGGACTTCCACAAAATTTTAGATAATGACTCTGGGATCCTAGTTAGACTAAGAGACTCATTCATCGATTGGGTTCAAGAAGGATTCCAAGACTTTTTTAGGCAACTTGAAGATCGGTTCCTTCTGTTTTCAGGAAGAAATAATTCTTCAGCCATTCAAGTACATGGTTTGGCAGAGGGAGCTCAAGGTGACAAAGCTTTTGCTGGCCTTGTCCTAGTGCTGGCACAGTTGTCTGCTTTTATTGAACAAACCGTCATCCCAAAAGTCACTGAGGAAATAGCTGCTTCCTTTTCTGGGGGTAGTGTTAGAGGCTACGAATCTGGACCAGCCTTTGTTCCTGGAGAAATCTGTCGAAAATTTCGATCAGCTGGTGAAAAATTCCTGCAGCTGTACGTAAATTTGAGAACTCAGAGGATATCACTTCTCCTGAAGAAGAGGTTTACCACACCCAATTGGGTTAAGCATAAGGAGCCAAGAGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGCTTGAAGTAGTAGCTAATGAAGTGAAGCAGATTTTGCCTCAAGGTTTACGTAAGCACCGCAGGACTGATAGTAATGGAAGTAGTGCTTCGTCAAGGAGCAACCCCTTACGAGAGGAGAAATTGGGTAGGTCAAATACTCAAAGAGCAAGGAGCCAACTTTTGGAAACACATCTAGCGAAACTGTTTAAGCAAAAAGTTGAAATTTTCACAAAAATAGAATATACACAGGAGTCTGTTATTACAACTATAGTTAAATTGTGCCTTAAAAGTTTACAAGAATTTGTCAGACTCCAGACTTTTAACCGGAGTGGATTCCAGCAAATTCAATTGGATATCCAGTTCTTAAGGATCCCTTTAAGGGAAATAGTTGAAGATGAAGCTGCAATCGACTTCTTGCTTGATGAGGTGATTGTTGCTACTGCAGAGCGATGCCTTGATCCAATTCCGTTAGAGCCTCCCATACTGGACAAACTTATACAAGCAAAGTTGGCTAAAACCAAGGAACAAAATACAGTATCTTCATAA 2307 0.4127 MGVDEVPLDDKAKRMRDLLSSFYSPDPSNTDNTSSKHASLDDINSTSFDPDYYMNILVYKSNLEGLLQQHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLLEKIMSVQSRSDGVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLDKCIKSEAYADAVRFYTGALPIFKAYGDSSFKDCKQASEEALAVIVKNLQEKLFSDSESIHVRAEAAVLLKQLDFPVNNLKAKLLEKLEQSVTDIQLNPEEINNASGDLSPSVSAHEAAIHEFVEAVRAFRVIFPDSEEQLIKLAQDLVTKNFVITEEYVKTRICPEDLLGVLGVIWNDVLLIDEVLQEAALSNHSLEAVKNVVKLYVRSAFSHLLQDISDALLQVLKKDGAEQYSLEVVFDASTKAVLQGGMNVLLDFHKILDNDSGILVRLRDSFIDWVQEGFQDFFRQLEDRFLLFSGRNNSSAIQVHGLAEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKVTEEIAASFSGGSVRGYESGPAFVPGEICRKFRSAGEKFLQLYVNLRTQRISLLLKKRFTTPNWVKHKEPREVHMFVDLFLQELEVVANEVKQILPQGLRKHRRTDSNGSSASSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFTKIEYTQESVITTIVKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRIPLREIVEDEAAIDFLLDEVIVATAERCLDPIPLEPPILDKLIQAKLAKTKEQNTVSS* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02080 768 PANTHER UNCHARACTERIZED 7 764 IPR014812 -
Rops6g02080 768 Pfam Vps51/Vps67 43 128 - -
Rops6g02080 768 Coils Coil 102 129 - -
Rops6g02080 768 Coils Coil 63 83 - -
Rops6g02080 768 MobiDBLite consensus disorder prediction 609 642 - -
Rops6g02080 768 MobiDBLite consensus disorder prediction 22 41 - -
Rops6g02080 768 MobiDBLite consensus disorder prediction 20 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02080 Rops-Chr6 38866114 38874271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02080 K20296 - gmx:100818891 1291.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02080 6 38866114 38874271 Rops6g02080 6 38866114 38874271 ECH
Rops8g03741 8 77833126 77839433 Rops6g02080 6 38866114 38874271 PCT