Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02078 ATGGCAACAATAGCTGGTGTAAGCCTTACAAGCCCAAGGGTACTTGCCAAGGTACCAGACTCACCGCAAAAGCCCCAGGCCACGAGGTTCCCACCGCAGTTCAGGCTCAGCCAGAGGTGCCCCGCTATTGTCGGGTCGACTCGGATGCTCAGAGTCCGACCCATTCGTGCTGCACCTGATAGTATATCGGAGAAAGTGGAGGAGAGCATAAAGAACGCGGAGGAGGCCTGCTCTGAAGACGCCAACACCGGGGAGTGTGCGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCAAGCCACGCAAGGGACAAGAAGAAAGACTCGGACCCGCTTGAGAACTACTGTAAGGACAACCCGGAGACTGATGAGTGCCGCACCTATGATAACTGA 396 0.5833 MATIAGVSLTSPRVLAKVPDSPQKPQATRFPPQFRLSQRCPAIVGSTRMLRVRPIRAAPDSISEKVEESIKNAEEACSEDANTGECAAAWDEVEELSAAASHARDKKKDSDPLENYCKDNPETDECRTYDN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02078 131 SMART CP12_2 62 131 IPR003823 -
Rops6g02078 131 MobiDBLite consensus disorder prediction 1 29 - -
Rops6g02078 131 MobiDBLite consensus disorder prediction 97 131 - -
Rops6g02078 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 131 IPR039314 -
Rops6g02078 131 Pfam CP12 domain 62 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02078 Rops-Chr6 38854513 38855174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02078 - - sind:105163045 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03743 8 77860205 77860960 Rops6g02078 6 38854513 38855174 PCT