Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02033 ATGAGTGAGGCTAGTGACATGGATGATTTTCCAAAGGGCTTATGTGGGTGGAGTTGGAAGGAGAACAAATTGTTTGAACTGGCTTTAGCCCTGGTAGATGAGAACCACCCAGAACGGTGGGAAGTGGTTGCAGCCATGGTTGGAGGAGAAAAGAGTGCAGAGGAAGTTCAAAAGCATTATGTGATACTTTTGGAGGATTTAGAGCTTATAGAATCTGGAAAACTGGACCATAAACTGGGAGAAGCTCAGCCCTGTATCCTAGTTGACCTTACCGAGTCTTTATGCTTGTCTGATAATGATACAAGCATGTAA 312 0.4391 MSEASDMDDFPKGLCGWSWKENKLFELALALVDENHPERWEVVAAMVGGEKSAEEVQKHYVILLEDLELIESGKLDHKLGEAQPCILVDLTESLCLSDNDTSM* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02033 103 Gene3D - 16 63 - -
Rops6g02033 103 FunFam Transcription factor SRM1 12 77 - -
Rops6g02033 103 SUPERFAMILY Homeodomain-like 17 71 IPR009057 -
Rops6g02033 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 12 75 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02033 Rops-Chr6 38295130 38296170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02033 - - var:108325196 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02033 6 38295130 38296170 Rops6g02033 6 38295130 38296170 ECH
Rops8g03818 8 78848617 78848910 Rops6g02033 6 38295130 38296170 PCT