Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01960 ATGGATCCCAACCAGTCTGTAGTTGAAAACTACGCCAATCCCAAGACTTGCTTCTTCCATGTTCTCTTCAAGGCTGCAGCCTTGGCATTTTACATTCTCTCGGCCCTCTTTATTGATAACTTTGTCATCATTTTCGTGGTTACCGTCCTTCTGGCTGCTCTTGATTTTTGGGTAGTCAAGAATGTGAGTGGGCGAATTTTAGTTGGTTTGAGATGGTGGAATGAAATTAATGATCTGGGTGAGAGTGTTTGGAGATTTGAGTGCCTTGACCACGAGTCATTGGCTCGGATGAACAAGAAAGATTCATGGCTTTTCTGGTGGACCCTTTACCTTACGGCAGTTGCATGGATTGTGCTGGTAATATTCTCACTCATAAGGCTTCAAGCTGATTATCTCCTTGTTGTCGGAGTTTGTTTGACCCTCAGCATTGCAAATATTGTTGGTTTTACCAAATGCAAAAAAGATGCTAAGAAGCAGATTCAACAATATGCCTCTCAGACAATAGCCACTCGGTTCTCATCTACCTTACAGTCAGCATTCAGTCTTGTCTGA 552 0.4275 MDPNQSVVENYANPKTCFFHVLFKAAALAFYILSALFIDNFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWRFECLDHESLARMNKKDSWLFWWTLYLTAVAWIVLVIFSLIRLQADYLLVVGVCLTLSIANIVGFTKCKKDAKKQIQQYASQTIATRFSSTLQSAFSLV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01960 183 Pfam Eukaryotic protein of unknown function (DUF846) 13 152 IPR008564 GO:0016020
Rops6g01960 183 PANTHER UNCHARACTERIZED 6 179 IPR008564 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01960 Rops-Chr6 37392610 37395661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01960 K26752 - gmx:100499702 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03892 8 79874539 79877021 Rops6g01960 6 37392610 37395661 ECH
Rops6g01960 6 37392610 37395661 Rops6g01960 6 37392610 37395661 ECH
Rops8g03892 8 79874539 79877021 Rops6g01960 6 37392610 37395661 PCT