Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01910 ATGGACGGTGATTCCTCATGGAGTGCTCGTCTTTCTTCTGCCTCCAGGCGCTATCATTCCGCTCTTCAATCTCGATCAGATATGTTCATGGGTTTTGACGAAAATGATGGAGATGATGATATAAGGGAGGAGTTTCTATGCCCATTTTGTTCTGAGTATTTTGATATTGTTGGGTTATGCTGCCACATTGATGAAGAGCATCCAATGGAGGCAAAAAATGGGGTATGTCCAGTTTGTGCTTTGAGGGTGGGGGTTGATATGGTAGCACACATAACCCTGCAACATGGAACTAGGGAATACATGCAGCGCAAAAGGAAATCACGGAAAGGTGGATCTTATTCAACACTGTCTTTATTGAGGAAGGAAATGCGAGAAGGAAATTTGCAATCCCTTTTTGGTGGGTCTTCGTGCATAGTGTCCTCGTCCAATGCCACACCTGATCCACTGTTGTCGTCATTCATATTGCCTCTAGGCAATGAATCAACCAGTTCTCAGCCTCACTTGCATACTGAGACCAGATCATCCAAGAAATGCTCAGATGAGACTGTATCAAAAAGAAATGTGGAGACTCCAACCTTGTCAGACAAGGATAAGGAGGAGAAGGCAAAAAGATGCGAGTTTGTTCAAGGGCTGTTGCTTTCCACCATGCTTGATGACGATTTATGA 666 0.4414 MDGDSSWSARLSSASRRYHSALQSRSDMFMGFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGVDMVAHITLQHGTREYMQRKRKSRKGGSYSTLSLLRKEMREGNLQSLFGGSSCIVSSSNATPDPLLSSFILPLGNESTSSQPHLHTETRSSKKCSDETVSKRNVETPTLSDKDKEEKAKRCEFVQGLLLSTMLDDDL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01910 221 Pfam Stress-induced protein Di19, C-terminal 116 216 IPR027935 -
Rops6g01910 221 MobiDBLite consensus disorder prediction 170 200 - -
Rops6g01910 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 30 218 IPR033347 -
Rops6g01910 221 MobiDBLite consensus disorder prediction 161 200 - -
Rops6g01910 221 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01910 Rops-Chr6 36959781 36962368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01910 - - gmx:100795155 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01910 6 36959781 36962368 Rops6g01910 6 36959781 36962368 ECH
Rops8g03712 8 77483448 77487108 Rops6g01910 6 36959781 36962368 ECH
Rops6g01910 6 36959781 36962368 Rops8g03712 8 77483448 77487108 ECH