Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01573 ATGGCTTACTGGTCTGCAGAAAATGCCATAAAGGCCTATCTTAGCACTTTGAAAATGGGTCAAAATGCCAAAGAGCCAAATGTAGCTGAGTTTATATCAGCACTAGCTGCTGGAAACAATGCACAACTCATGGTTGTGGCTTGTGCTGCTGCAGCAGACTCAACCACACTAGCCTTGGTTGCTGCTGCTCATCAAACTGGTGGCCAAGTCATTTGCATTGTCCGTGGCCATAAAGAACTTAATGCCTCCAAAAATGCCTTGGGAATTGCTGCTCATCAAGTTCAATTCATGGTTGGAGAAGCTCAAGAACTGCTCTCAAACCAATATGAGGCAGCAGATTTTTTGCTCATTGACTGCAACCTTGAGAATCATGAAGAGATTCTTAAAGCAGTTCAAGAGGGTAGGAAGCAAAATGGCACAGTGGTTGTGGGTTACAGTGCATTTAGCTGCAAAAGGTCTTGGTTGTCATGTGGATCAAAAACTCAGCTGCTGCCTATAGGAGAAGGGTTGCTTGTGACAAGATTTGGAGTAACTGGCACTAGTCCTAAATATGGCAGCAAAATGGGGGGGAAGATCAAGAGCCATTGGGTTGTCAAGGTAGATAAATGCACAGGCGAGGAACATGTGTTCAGGGTCAGATTTCCTCATGGGAAAGTGATTCAAGCTTAA 669 0.4454 MAYWSAENAIKAYLSTLKMGQNAKEPNVAEFISALAAGNNAQLMVVACAAAADSTTLALVAAAHQTGGQVICIVRGHKELNASKNALGIAAHQVQFMVGEAQELLSNQYEAADFLLIDCNLENHEEILKAVQEGRKQNGTVVVGYSAFSCKRSWLSCGSKTQLLPIGEGLLVTRFGVTGTSPKYGSKMGGKIKSHWVVKVDKCTGEEHVFRVRFPHGKVIQA* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01573 222 PANTHER DUF1442 FAMILY PROTEIN 3 211 IPR009902 -
Rops6g01573 222 Gene3D Vaccinia Virus protein VP39 6 174 IPR029063 -
Rops6g01573 222 Pfam Protein of unknown function (DUF1442) 4 211 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01573 Rops-Chr6 32726223 32727387 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01573 - - gmx:100816283 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01573 6 32726223 32727387 Rops6g01573 6 32726223 32727387 ECH
Rops5g00693 5 12262247 12263087 Rops6g01573 6 32726223 32727387 PCT