Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01348 ATGAGGGAGTTTCCTTCTTGTTTTGGGGAAAATGGTGTTCAGGTTGCTGATTCATCCTCCTCAAGTACCACAAGAGCAGCTCAAAATGCGGTTACTTGTGTCTATCAGTGCAAATTAAGAGACCGTCTTTCTTTGATTTCAGTCTCATGGACCAAAACTCTGATGGGTCAAGGCTTGAGTGTGGGAATTGATGACTTGATCAATGGTTGCCTCTGCAAGGTTGAAATAAAGCCATGGTTGTTCTCAAAAAGAAAAGGGTCAAAAATTTTGGAGGTCCCATCTGGTAAAATTCATGTCTTTTGGGACTTGAGTTGTGCTAAATTTGGTTCTGGGCCTGAGCCTTTAGAGGGATTTTATTTAGCAGTTGTGTTCAACAAGGAAATGATCTTGCTCCTAGGGGATCTGAAACATGAGGCATGCAAGAAGATTGGCAGTAATTGTCTTAATGCTCACTCTGGTGCCATTTTTATTGCAAAGAAAGAGCACATTTTTGGGAAGAAGTTTTATGGTGCAAAGGCTCAATTTTGTGATAAGGGGCAAGTGCATGATGTGACAATTGAGTGTGATACTGTTGGGCTTAATGACCCTCATCTTGTGATTCGAATTGATAGTAAGACAGTGATGCAGGTGAAGCGACTCAAGTGGAAATTCAGAGGCAATCACACCATTTTGGTTGATGGGGTTCCTGTTGAGGTGTTTTGGGATGTGCATAATTGGCTTTTTGGGAATGCTATGGGCAATGCAGTGTTTATGTTCCAAACAAGCATTTCAACTGAGAAGCTTTGTGAAAGCCAATTAGTTTCGAATCCCTCTTCACCAACATGGGCTTCTTCTCAGCAGTTAAGGAATTCCCAGTTGCAAGGTTTTGGATTCTCTCTGATTTTATATGCTTGGAAGAATAATAGTCAATAG 912 0.4112 MREFPSCFGENGVQVADSSSSSTTRAAQNAVTCVYQCKLRDRLSLISVSWTKTLMGQGLSVGIDDLINGCLCKVEIKPWLFSKRKGSKILEVPSGKIHVFWDLSCAKFGSGPEPLEGFYLAVVFNKEMILLLGDLKHEACKKIGSNCLNAHSGAIFIAKKEHIFGKKFYGAKAQFCDKGQVHDVTIECDTVGLNDPHLVIRIDSKTVMQVKRLKWKFRGNHTILVDGVPVEVFWDVHNWLFGNAMGNAVFMFQTSISTEKLCESQLVSNPSSPTWASSQQLRNSQLQGFGFSLILYAWKNNSQ* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01348 303 PANTHER EXPRESSED PROTEIN 4 299 IPR008586 -
Rops6g01348 303 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01348 Rops-Chr6 28952426 28953936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01348 1 300 EF-hand Containing Proteins AT5G28150 60.927 5.52e-122 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01348 - - gmx:100793503 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01348 6 28952426 28953936 Rops6g01348 6 28952426 28953936 ECH
Rops8g03014 8 67130774 67132182 Rops6g01348 6 28952426 28953936 PCT