Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01304 ATGGATGCAAAAATGGTTGCACATAGCATGAGTCCAACACTAACTTCAGCTCCTTATTGGAAGCTCAGACGTAAACCAAAAAACCCTTCTGTTGTTGGAGTGCTCGCAAGACCTGCAGATGACATAGCAGGAGAAACATTGAAAAAAACTAATGTATACAAAGATAACTGGTTGGATCACTTAGCCATAAACCATTTATCGACAAGTGTTCAAGCGGCAATAGGACTCAGTAACAGTAAGAGAGGGTATGAGAGCCTGGTAGAGGCAGCTACCATGGCTTTTAAGAAATTTAGTCCTATTCAACAGCGAGAAATTGTCATTCAAGCACTTGACAGAGCCTTCCCAAAGCCAATACTTTCATTGATAAGGACACTGCTACCACCATCTAAATTCGCAAGGGAATATTTTGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTAGTCGGTCCCTCCGAGGTGAGAGAATCGGAGGTCAACGGGAGAAGAGAAAAAAATGTAGTACACATAAAAAAATGCAGGTTTTTAGAAGAGGCAAATTGTGTTGGTATGTGTATTAATCTCTGCAAAATGCCATCTCAATCGTTTATAAAGGACTCTCTGGGCATGCCAGTCAACATGGTCCCTAATTTTGATGACATGAGTTGTGAGATGATATTTGGCCAAAATCCCCCAGCATCAACTGATGATCCAGCACTCAAACAACCATGCTATAAACTATGCAAGGCACAGAAAAACCATGGAACGAATTGCCTCAGTTAA 759 0.4137 MDAKMVAHSMSPTLTSAPYWKLRRKPKNPSVVGVLARPADDIAGETLKKTNVYKDNWLDHLAINHLSTSVQAAIGLSNSKRGYESLVEAATMAFKKFSPIQQREIVIQALDRAFPKPILSLIRTLLPPSKFAREYFAVFTTLFFAWLVGPSEVRESEVNGRREKNVVHIKKCRFLEEANCVGMCINLCKMPSQSFIKDSLGMPVNMVPNFDDMSCEMIFGQNPPASTDDPALKQPCYKLCKAQKNHGTNCLS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01304 252 Pfam Beta-carotene isomerase D27-like, C-terminal 146 226 IPR025114 GO:0005506
Rops6g01304 252 PANTHER BETA-CAROTENE ISOMERASE D27 24 250 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01304 Rops-Chr6 28339156 28345374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01304 K17911 - gmx:100782912 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03048 8 67733722 67738981 Rops6g01304 6 28339156 28345374 PCT