Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01106 ATGGCCAAAACGACATTAACCACCGTCGTTCTCCTTTTCATCTTCCTCATCTCCCCTTCCATCGCAGAGATCAAATCCCTAACCATAACCTCCGACACTCGTCCCATGATCCTCTTCGAGAAATTCGGCTTCACCCACACCGGCCACGTCTCCATCGCCGTCTCCGAGGTCTCCGTGGTTTCATCGGCGGCGCAACCCGACCCGCGCCGTCTCGGATTCTTCCTCCTCAGCGAAGAATCGTTGCTCCAAGTTCTCATCGAGATCCAACAAAACCCTAGCTTCTGCGTTCTCGATTCCCGTTATATCACGCACCTCTTCACATTCCGCGACCTATCTCCTCCTCCAACGGCGTCGTTTAACCGTTCCTACCCCGTAACTTCCCCTAATGAGTTCAGCCTCTTCTTCGCTAATTGCGCACCTGAAAGCTCCGTCTCTATGGCCATTCACACCGAGCTTTACAACCTCGACGCCGATGATTCTCGCGATTACCTCTCCGCCGGTCAAACCCAGCTTCCTTCGCTCTTTTTCTTCTTCTCCATCGCTTACATCGCCTTCCTCGGTTTCTGGCTCTATCTCTGTTACACAAACAAACGCTCCATTCACCGGATCCACCTTCTCATGGCCACGCTCCTTCTCATGAAGGCTCTTAACCTAATCTGCGCAGCAGTGGATAAACACTATGTCAAAGTCACCGGTACCCCTCATGGTTGGGATGTTGTTTTCTATATCTTTCAGTTCATTCGTGGCGTTTTGCTCTTCACCGTCATCGTTTTGATTGGTACTGGCTGGTCATTCCTCAAGCCTTTCTTGCAGGAGAGGGAGAAGAAGGTTCTCATGGTAGTGATCCCTCTTCAGGTTCTGGCTAATCTCGCTTCGGTAGTAATTGGTGAGACTGGACCCTTTATTAAAGATTGGGTTACTTGGAATCAGGTTTTCCTGCTGGTAGATATAATCTGTTGTTGTGCTATTATTTTCCCTATTGTTTGGTCCATTAGATCGCTTAGGGAAACCTCGAAAACCGATGGCAAGGCTGCGAGGAATTTGGCAAAGTTGACCCTTTTTAGGCAATTCTACATTGTTGTTATTGGGTACTTGTATTTCACAAGAATTGTGGTTTTTGCTTTGAGAACCATTGCTGCATATAAGTTCCAGTGGGTGAGTAATTTCGCTGAGGAGGCTGCTAGTCTTGCATTTTATGCTATCATGTTTTACATGTTTAGTCCTGTTGAGAAGAATGAGTATTTTGTCCTTGATGAGGAGGAAGAAGAGGCAGCGGAGGTTGCTCTCAAAGAAGAAGAATTTGAGCTTTGA 1311 0.4767 MAKTTLTTVVLLFIFLISPSIAEIKSLTITSDTRPMILFEKFGFTHTGHVSIAVSEVSVVSSAAQPDPRRLGFFLLSEESLLQVLIEIQQNPSFCVLDSRYITHLFTFRDLSPPPTASFNRSYPVTSPNEFSLFFANCAPESSVSMAIHTELYNLDADDSRDYLSAGQTQLPSLFFFFSIAYIAFLGFWLYLCYTNKRSIHRIHLLMATLLLMKALNLICAAVDKHYVKVTGTPHGWDVVFYIFQFIRGVLLFTVIVLIGTGWSFLKPFLQEREKKVLMVVIPLQVLANLASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALRTIAAYKFQWVSNFAEEAASLAFYAIMFYMFSPVEKNEYFVLDEEEEEAAEVALKEEEFEL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01106 436 Coils Coil 417 436 - -
Rops6g01106 436 Pfam Lung seven transmembrane receptor 131 412 IPR009637 GO:0016020
Rops6g01106 436 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 11 424 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01106 Rops-Chr6 25562855 25564480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01106 K22985 - cave:132192116 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01106 6 25562855 25564480 Rops6g01106 6 25562855 25564480 ECH
Rops8g03237 8 70865861 70867548 Rops6g01106 6 25562855 25564480 PCT