Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01085 ATGACCCGCCTTGCGAAGCACGTGTCCTCCGTCTCTTCCCTGGCGAGGAGATACTTCTCCTCCGAAGTCAACTCTCACGCGCCTCCGTACAACGCCGCCGCGCGTTTCAGCCATGTTCCGGCGCGCAAGAACAGCCTTGTACGGTGGGTGTTCCTTGGTTGCCCTGGCGTCGGGAAAGGCACCTACGCTAGCCGGCTTTCCAATCTCCTCGGCGTTCCTCACATCGCCACCGGCGATCTTGTTCGGAAAGAACTCGCCTCCTCTGGTCCCCTTTCTTCCCAGCTATCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATTATTATAAGTTTATTGTCAAAGTGGCTTGATGCTGGGGAAACTAAAGGTGAACTGGGATTTATTCTTGATGGTTTTCCTCGAACAATAAAGCAAGCGGAAATATTGGAAGGGGTAACTGACATTGACTTGGTTATCAATCTGAAGCTCCGAGAAGATGTACTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGTAATTTTAATGTTGCTTCCATTGACATCAAGGCTGAGAATGGGAGCCCTGGAATTACCATGGCTCCAATTCTTCCTCCCACGAATTGTATGTCGAAGCTTATTACTCGATCAGATGATACTGAAGCAGTGGTCAAAGAAAGGCTTCGAATATACAATGAAATGAGTCGGCCGGTGGAGGAGTTTTACCGAAATAGAGGGAAATTATTGGAATTTAACCTTCCTGGAGGAATCCCAGAATCTTGGCCAAAGTTACTACAAGCTCTTAATCTTGATGATTATGAGGACAAGCGCTCTGCTACAGCATAA 840 0.4738 MTRLAKHVSSVSSLARRYFSSEVNSHAPPYNAAARFSHVPARKNSLVRWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRKELASSGPLSSQLSEIVKQGQLVSDEIIISLLSKWLDAGETKGELGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASIDIKAENGSPGITMAPILPPTNCMSKLITRSDDTEAVVKERLRIYNEMSRPVEEFYRNRGKLLEFNLPGGIPESWPKLLQALNLDDYEDKRSATA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01085 279 Gene3D - 36 268 IPR027417 -
Rops6g01085 279 NCBIfam adenylate kinase 48 267 IPR006259 GO:0004017|GO:0005524|GO:0016776
Rops6g01085 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 267 IPR027417 -
Rops6g01085 279 ProSitePatterns Adenylate kinase signature. 129 140 IPR033690 -
Rops6g01085 279 PANTHER NUCLEOTIDE KINASE 36 264 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops6g01085 279 Pfam Adenylate kinase 52 244 - -
Rops6g01085 279 Hamap Adenylate kinase [adk]. 47 267 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops6g01085 279 CDD ADK 48 250 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops6g01085 279 PRINTS Adenylate kinase signature 129 145 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops6g01085 279 PRINTS Adenylate kinase signature 50 63 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops6g01085 279 PRINTS Adenylate kinase signature 214 229 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops6g01085 279 PRINTS Adenylate kinase signature 231 245 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops6g01085 279 PRINTS Adenylate kinase signature 78 92 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01085 Rops-Chr6 25357915 25361394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01085 K00939 - gmx:100777619 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01085 6 25357915 25361394 Rops6g01085 6 25357915 25361394 ECH
Rops8g03260 8 71123465 71126993 Rops6g01085 6 25357915 25361394 PCT