Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00940 ATGGAAAGCACGGCATTGAAGGCAGAGAATCTAAAGCCAGTTATCCTCAAAGCTGGTGTTCCTTTAGCTGTTTCTTTGGCTGGTTTGATCTATGCATGGATCATGACAAAGAAATGCTTCCCTAAAGTCTCTTCTTTATCAGAAAATGAGACTGATTCCCCTGATAAGGGAACTAAACATGAAGAAAACTTTCACAATCTTTCTTCTATGGATGATGATGAAGAACCTGCTTCTCTTATAGATAGCAGTGTTTTTTCTGGTAGCTTGGTGATCCATGACAACCCCTTATGTTTGGAACAAGAGATCACTGGCTTAAGAAGCCAAATTGAAGGTCTGCAAATGAGAGAATTGGCCTTACGTTTGCAGTTTGACCAGTATTGTGAAATGAAAGAACAAGAATCTTTGCTTATGGAAATCAAAAACATGTTGTCACTAGAGACTGCTAGAGTTGAAGTCTTGGATAAAGAGATTTCATCCATAGAGACAGAAACTATGAGGTTGGAGAATTTTGTAGTCCAATACCTGAGGATTATTGAACAACTTGAGTATTGGAAATCAGAGAATAAGTTGCTTCATAGGAAGGCTCAGAAGCTACTTAGGAAATCAAAGGCTCAATCCCACTTGATAAAGGAGCAGAATTTGAAGATCAAAGAGGAAGAAGAAGAAATTATGAGAAACCATGATGCCTTGCAAACAAGGACTAGTGTTATTAATAAGCTAGAGGGTGAAATCAGGGAACTACAAAGGGTTTTGGATCAATTCCAAGATGAGAAGAATGAACTTCTGAAGAAGCTTGACACATCAGAAGCACATGCAGCTAAGGTAGATAAGGAACAGATGCATAGAAAACCACTGAAATTTTATTTGCAGGTTGAACCAGAAGATGTAAGGAAGGAGGATTACAACCAGCTTCTCAATGAATTGGAACAAGTCAAGAAGGAACGTGCTATTGAAGTTGAAGAATTGAATCACTTGAGGAGGGTCAATGCTTGGTTAAAGCAAGAGTTAATGAGGCACCATGAACAACAACAGGATCATGGTAGAGACCATATAGAACTAGAATTTGAAGGAAGTGGAGGAGTTATGCATTATGACTCAGAACATGAATTGCATTATTCCCATTTGGAGCATCATAATGTGTCTTGCATTGGTTCTGTTCATGGTTCCAAAAGGAGAAAAATGCTCAAAAGGCTGAAGAGATGGGTGGAAGGCAGTGAAAAGGTAAGAGTGAAATCAGAAGAGAAAAATAGTAATGAAATTAAGTGCTTTGGGAGCCATTCTGTTTCCTATGGATCAAAGAAAGTTGATGTTCCTGCTACTGGAAGGTTTTGTTCTAGTGCTTGA 1344 0.3854 MESTALKAENLKPVILKAGVPLAVSLAGLIYAWIMTKKCFPKVSSLSENETDSPDKGTKHEENFHNLSSMDDDEEPASLIDSSVFSGSLVIHDNPLCLEQEITGLRSQIEGLQMRELALRLQFDQYCEMKEQESLLMEIKNMLSLETARVEVLDKEISSIETETMRLENFVVQYLRIIEQLEYWKSENKLLHRKAQKLLRKSKAQSHLIKEQNLKIKEEEEEIMRNHDALQTRTSVINKLEGEIRELQRVLDQFQDEKNELLKKLDTSEAHAAKVDKEQMHRKPLKFYLQVEPEDVRKEDYNQLLNELEQVKKERAIEVEELNHLRRVNAWLKQELMRHHEQQQDHGRDHIELEFEGSGGVMHYDSEHELHYSHLEHHNVSCIGSVHGSKRRKMLKRLKRWVEGSEKVRVKSEEKNSNEIKCFGSHSVSYGSKKVDVPATGRFCSSA* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00940 447 Coils Coil 294 328 - -
Rops6g00940 447 MobiDBLite consensus disorder prediction 45 75 - -
Rops6g00940 447 Coils Coil 237 271 - -
Rops6g00940 447 Coils Coil 209 229 - -
Rops6g00940 447 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 8 339 IPR040265 -
Rops6g00940 447 MobiDBLite consensus disorder prediction 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00940 Rops-Chr6 22822441 22824024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00940 - - gmx:100819954 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00940 6 22822441 22824024 Rops6g00940 6 22822441 22824024 ECH
Rops8g03409 8 73162608 73164608 Rops6g00940 6 22822441 22824024 PCT