Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00937 ATGGCTAATCGTTGTGCATCGTTGGCTTCAAAAGCAACTTCATCCATGAAGCTCTTGTTGTCCATGGTGCCTCTAATCCTGGTTGTGGGGTTTGTTTTTGTAATGGCTCCAAGCTTTTACAACTGGGATTTTATTGGAAAAACTCCTTTCTCATGGACCTCTTTTACTCCTTCTTCTTCTTCCTTGTTTGATGATAAACAAGGAGAAGGGGTTTTGGATTTGAGGTTGGGAGCTATGGTGGAAGTAGATGCTCGCAGCAAGGAGGAGAAGAAAGCCGTTTCTGAAGATGACATTGTCTTCAATCATTCATCTTCTTCTCCCTCACTTCCTGTTCATGCCACACAAACACTTCAACAATCTAATGAAACTGCAGTTCTCAATGTCTCCAAACCTTGGCCTAATATGACTTCTGAGAATGAAATTTATGTACCTCATCTGAAAAAGAAGCAGCCAAAAAAGTTCAGCATCTTAGATAGAATCGAAGTCGGTCAACGACAAGCTCGAATTTCCATTAGAGAAGCCAGAAACAGGAATCAAACACAAGATCCAGACTATGTTCCAGTAGGTCCAATGTATTTGAATGCTAAGGCATTTCACAGGAGCTACTTAGAAATGGAGAAACAGTTCAAAGTATTTGTCTATGAAGAAGGGGAGCCTCCAGTTTTTCACGATGGACCTTGCAAAGGTATATATTCCATGGAGGGGAACTTCATCCATGCTATTGAGATGAATGACCAATTTCGAACAAGAGATCCTGAGAAAGCACATGTATTTTTCCTTCCTTTTAGTGTAGTAATGATGGTCCAATTTGTGTATGTAACGGACTCCCATGATTTTGGCCCCATAAGAAAAACAGTCACGGATTATGTCAATGTCATTGCTGGAAAATATCCTTATTGGAACCGAAGCCTTGGAGCTGATCATTTCATGCTTTCTTGCCATGATTGGGGGCCAATGGCTTCATTCTCCATACCTTACTTGCATAAGAACTCGATTCGTGTGCTTTGCAATGCCAACACCTCTGAAAGATTCAACCCTGTAAAGGATGTTTCTTTTCCTGAAATCAATCTCCAAACCGGTTCAATAAACGGTTTCCTAGGTGGGCCATCTGCATCTAAACGTTCAGTTTTAGCTTTCTTTGCTGGACGACTTCATGGTCCCATAAGGCCTGTTCTTTTTGAACATTGGGAAAACAAAGATGAAGATATCATTGCTCACAAGTACCTTCCAAAGGGTGTTTCTTACTATGGGATGCTGAGGAAGAGCAAGTACTGCCTCTGCCCAAGTGGGTATGAAGTGGCTAGCCCAAGGGTGGTGGAAGCAATATACACAGGGTGTGTTCCAGTGCTTATTTCAGAACATTATGTCCCTCCATTTAGTGATGTTTTGAACTGGAAGACTTTCTCAGTTGAGCTTTCTGTGAAGGATATCCCTAACTTGAAGAAAATTCTTATGAGTATTTCTCCAAGGCAGTATATAAGAATGCAGAAAAGGGTGGTACAAATTAGGAGACACTTTGAGGTGCATTCTCCTCCTAAGAGATTTGATGTGTTTCATATGATCCTTCATTCTATATGGCTTAGAAGACTCAACATCAGAGTCCATGATGATCAGTAA 1617 0.4106 MANRCASLASKATSSMKLLLSMVPLILVVGFVFVMAPSFYNWDFIGKTPFSWTSFTPSSSSLFDDKQGEGVLDLRLGAMVEVDARSKEEKKAVSEDDIVFNHSSSSPSLPVHATQTLQQSNETAVLNVSKPWPNMTSENEIYVPHLKKKQPKKFSILDRIEVGQRQARISIREARNRNQTQDPDYVPVGPMYLNAKAFHRSYLEMEKQFKVFVYEEGEPPVFHDGPCKGIYSMEGNFIHAIEMNDQFRTRDPEKAHVFFLPFSVVMMVQFVYVTDSHDFGPIRKTVTDYVNVIAGKYPYWNRSLGADHFMLSCHDWGPMASFSIPYLHKNSIRVLCNANTSERFNPVKDVSFPEINLQTGSINGFLGGPSASKRSVLAFFAGRLHGPIRPVLFEHWENKDEDIIAHKYLPKGVSYYGMLRKSKYCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFSDVLNWKTFSVELSVKDIPNLKKILMSISPRQYIRMQKRVVQIRRHFEVHSPPKRFDVFHMILHSIWLRRLNIRVHDDQ* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00937 538 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 29 525 IPR004263 GO:0006486|GO:0016757
Rops6g00937 538 Pfam Exostosin family 206 487 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00937 Rops-Chr6 22791538 22796403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00937 - - gmx:100806278 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00937 6 22791538 22796403 Rops6g00937 6 22791538 22796403 ECH
Rops8g03412 8 73196115 73199671 Rops6g00937 6 22791538 22796403 PCT