Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00923 ATGAGGGGTGAAACGGTGAACGGGACATGGTTCAATGGTTTTTGGCCACTCTCCCGCAAGAGTGCGTCAGATGAAAAGGAAGTAATTGGAATTTTGGCATTTGAAGTTGTGGCCTTGATGTCTAAGGTGGTTAATTTATGGCATTCTCTGAGTGATAGGGAGGTAATGAGTCTGAGGGAATGGATAGTAAACTCTGATGGGGTCAAAATGTTGGTTTCTGATGATGATTATTTCTTGATGGAGCTTGCATGGAATGAGATACTCAATAACTTTGAATCTCTAGCAAGGTCTGTGGCCAGGTTGAGTAAGAGGTGCAAGGATCCAGTGTATCATGGTTATGAACGTTTTGTTCAGAACCCAGGTCAAAATTTTCTTCAATGGTCAGGGTGGGAATATAGATGGAAGAAGATGGAGAGGAAGGTGAAGAAAATGGAAAGATTTGTTGCTGCCATGTCACTTTTGTCTCAAGAGCTTGAGATACTAGCAGAGCGTGAACAAACTTTCAGGAGAATGAAGGTGAATCCTGAGTCTAAGAGGGTGAAATTGCTTGAGTTTCAGAAGAAGGTCATGTGGCAGCGCCAACAAGTGAAAAATATTAGAGACATGTCTCCATGGAATAGAAGTTATGACTATGTTGTCCGGTTGTTGGCAAGATCATTGTTTACAATTCTAGAGAGAATCATACTTGTCTTTGGAAATAGTCATTTACCAATTAAAAAGCAACAAAATGGTTCCCTCCCTATGAATACTAATAATCATCTTGCACGCAACCATTCCTTCCCTACTCTCATGCATTCTCCTGTTTATCCTTCTGAGACCAATCCAAATGGATTTTGTTCAGAACCTATTTGGAGCATGCCAGTGTCAAACTCGGGGTGTGTAGTTGACAAGAGCAAAAGAAAGAACAAGAAAGAGCAGCAAGTGCTTCATTCACAAAAGCACTTGCCCTCAGAAAGCAAGCAGTTGAAACATATCGGACCCTTCAAAGGGTGCATGATGTCAAATGGAAATGATTCTCCTATTGTTCAGAGTTGTATGTCAACTAATGGTGGTTCTATGAGGTTGAAAAACATTGATAACAACATGAAAACAGTGGATAATTTGTCTCTCTTTAACAGAAGTAGAGTGTATTTTAAACTATCCCTCAAGGGTAGGTTAAAGCCAGCTCCATCTACACTTGGTAATGCAGCTTTAGCTCTACATTATGCAAATGTGATTATTTTGATAGAGAAGATAGTTTCAGCAGCACCTCACCCTATTGATCTTCAAACCAGATATGATTTATACAATATGTTACCAACCACTATAAGAACTGCTTTGAGGGCTAAGCTTAAGTGGTATGCGAAAAGCAAGCATGCCATGGTTCATGATGCTAGCCTTGCAGTAGAATGGAGTTTGGTGGTCACACAGATATTGGAATGGTTGGCTCCATTGGCACACAACATGGTAAGGTGGCATTCTGAGAGGAATTTTGAGAGGGAGCACACTACTTTGAAAGCAAATGTTTTACTTGTGCAGACTCTTCACTTTGCAAACCAATCAAAAACTGAAGCTGCAATTGTTGAGCTCCTTGTTGGTCTTCACCATGTATGCAGGATTGATAGAGAAGCTCGTGTGAGAGATACACCAGAGTTCGCAGTCTTTTAA 1647 0.4062 MRGETVNGTWFNGFWPLSRKSASDEKEVIGILAFEVVALMSKVVNLWHSLSDREVMSLREWIVNSDGVKMLVSDDDYFLMELAWNEILNNFESLARSVARLSKRCKDPVYHGYERFVQNPGQNFLQWSGWEYRWKKMERKVKKMERFVAAMSLLSQELEILAEREQTFRRMKVNPESKRVKLLEFQKKVMWQRQQVKNIRDMSPWNRSYDYVVRLLARSLFTILERIILVFGNSHLPIKKQQNGSLPMNTNNHLARNHSFPTLMHSPVYPSETNPNGFCSEPIWSMPVSNSGCVVDKSKRKNKKEQQVLHSQKHLPSESKQLKHIGPFKGCMMSNGNDSPIVQSCMSTNGGSMRLKNIDNNMKTVDNLSLFNRSRVYFKLSLKGRLKPAPSTLGNAALALHYANVIILIEKIVSAAPHPIDLQTRYDLYNMLPTTIRTALRAKLKWYAKSKHAMVHDASLAVEWSLVVTQILEWLAPLAHNMVRWHSERNFEREHTTLKANVLLVQTLHFANQSKTEAAIVELLVGLHHVCRIDREARVRDTPEFAVF* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00923 548 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Rops6g00923 548 Pfam Protein of unknown function (DUF668) 392 484 IPR007700 GO:0045927
Rops6g00923 548 PANTHER BNAC09G50660D PROTEIN 23 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00923 Rops-Chr6 22609443 22611865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00923 - - gmx:100804666 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00923 6 22609443 22611865 Rops6g00923 6 22609443 22611865 ECH
Rops8g03425 8 73340718 73343335 Rops6g00923 6 22609443 22611865 PCT