Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00880 ATGGCAAGGGTGTCTTCAGATGCTCTAATTGTTGGGAGAGTCATAGGAGATGTTCTTGATTCTTTCACCCCAAGCATAGAAATGACTGTAACTTACAACAACAAGCAAGTCTTCAATGGATATGAACTCTTCCCTTCCAGAGTTACCACCAAGCCCAGGGTTGAGATTAATGGAGGTGACATGAGGACCCTCTACACACTGATCATGACAGACCCGGATGTTCCTGGCCCTAGTGATCCTTATCTGAGAGAGCACTTGCACTGGATAGTGACAGACATTCCAGGAACCACAGATGCCACATTTGGTAATGAGTTGGCAAGCTATGAAATCCCAAAGCCTAATATAGGGATCCACAGGTTTGTGTTTATCCTTTTCAAGCAAAAATGTAGGAAGTCTGTGGCTCCACCATCTTCAAGGGATCACTTCAACACACGGAATTTCTCAGCTGAGAATGACCTTGGCCTCCCTGTTGCTGCTGTCTACTTCAATGCACGCAGGGAAACTGCTTCAAGAAGACGCTAG 522 0.4579 MARVSSDALIVGRVIGDVLDSFTPSIEMTVTYNNKQVFNGYELFPSRVTTKPRVEINGGDMRTLYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGNELASYEIPKPNIGIHRFVFILFKQKCRKSVAPPSSRDHFNTRNFSAENDLGLPVAAVYFNARRETASRRR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00880 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Rops6g00880 173 CDD PEBP_euk 28 164 IPR035810 -
Rops6g00880 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Rops6g00880 173 Gene3D - 1 173 IPR036610 -
Rops6g00880 173 FunFam Terminal flower 1 1 173 - -
Rops6g00880 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 168 IPR035810 -
Rops6g00880 173 Pfam Phosphatidylethanolamine-binding protein 49 162 IPR008914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00880 Rops-Chr6 21850151 21851351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00880 K06910 - qsu:112017308 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03478 8 74187207 74188498 Rops6g00880 6 21850151 21851351 PCT