Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00603 ATGGGAGAAGCACCAACATTCATTCCTCAAGACCTACAGAATGGTACTAGTGATGGCTTTGAATTAAGAAAAGGAACTTTCGAAACAGCTACTACCATTGGTGATAAAACGTACGTCATTGGTGGAGCTAATAGTGAAACTTTGTCCATTAAAGTTCGAATCTTTGACAACTGTCTTAGACAATGGATTAATCCCACTGTACTAGGCACCAAACCCAAATCATGTGAAGGTCACTCAGCAGTGTTTTTGAATGACAGAATACTAATTCTTAAGAAGAATTCTAGGCCAGATGATCATACATGGTTTCTAGAGGTAGACACCCAATATGTCAGGCAGATGAAAAATTTTTTGGGGACAGAGGTTGTTGCATGGAGTAAGGGTGTGATAGGCAATGCTGAGAAACCTTTTGTTATTAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCAATGCTCATGAAGGAATTCCCATCCATGTTTGGTTTCTCTGTGAGCCACACAACACGAGCCCCAAGAGGTATGGAGAAAGATGGGGTCCATTACCATTTTACTGAAAAGAATGTCATGGAAAAAGAGATTAAGGATGGAAACTTTTTGGAGTTTGCTTCTGTCCATGGTAATCTATATGGGACCAGTGTGGAGGCTGTTGAACTGGTATCAGATGCAGGGAAACGATGTATTCTTGATATTGATGTTCAAGGGGCAAGATCAGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTATCTGCCCCCCATCAATGGAAGAGCTGGAGAAGCGTCTTCGTGACAGAGGGACAGAGACAGAAGAACAGATCCTAAAGCGATTACGAAATGCTCAGGCTGAGATTGAGCAAGGGAAATCATTAGGCATATTTGATTTCATCTTATACAATGACAAACTTGAAAAGTGTTATGAGAGTCTAAAGAAATTATTGGTACTTGATGGTTGTGTCACTCCTCCACCCAAGTCAGCACCAAGAGAGATCAATCTCCCAAAGAATCATTCAGTGACAAATATTGATGACAAAATCATCATAAACTGCATCTCTTCCGGACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGATGTGTCCTCATTTAAAGGGGGTGCACCTGGACGGACAAGAGGGCTAGATTTTCAAGCCATTGACTCATTTTCAGATGGCTTCATTGGGATGGATCAACAACAATGA 1203 0.4081 MGEAPTFIPQDLQNGTSDGFELRKGTFETATTIGDKTYVIGGANSETLSIKVRIFDNCLRQWINPTVLGTKPKSCEGHSAVFLNDRILILKKNSRPDDHTWFLEVDTQYVRQMKNFLGTEVVAWSKGVIGNAEKPFVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKNVMEKEIKDGNFLEFASVHGNLYGTSVEAVELVSDAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRDRGTETEEQILKRLRNAQAEIEQGKSLGIFDFILYNDKLEKCYESLKKLLVLDGCVTPPPKSAPREINLPKNHSVTNIDDKIIINCISSGLEKESKNLIMLDVSSFKGGAPGRTRGLDFQAIDSFSDGFIGMDQQQ* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00603 400 CDD GMPK 135 311 - -
Rops6g00603 400 Gene3D - 19 131 IPR015915 GO:0005515
Rops6g00603 400 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Rops6g00603 400 PANTHER GUANYLATE KINASE-RELATED 29 345 - -
Rops6g00603 400 Pfam Guanylate kinase 133 314 IPR008145 -
Rops6g00603 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Rops6g00603 400 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Rops6g00603 400 Gene3D - 132 316 IPR027417 -
Rops6g00603 400 NCBIfam guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Rops6g00603 400 SMART gk_7 132 318 IPR008145 -
Rops6g00603 400 SUPERFAMILY Galactose oxidase, central domain 19 115 IPR011043 -
Rops6g00603 400 FunFam Guanylate kinase 2 126 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00603 Rops-Chr6 15672989 15676659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00603 K00942 - gmx:100812658 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00603 6 15672989 15676659 Rops6g00603 6 15672989 15676659 ECH
Rops8g02831 8 63802513 63806096 Rops6g00603 6 15672989 15676659 PCT