Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02230 ATGGGCATGGTTGAAACTCAATCCAAGGAACCATCTTGGGGTTCATCTCCTTTGGTAGAAAAGGCAAACATTCAAGGGTCAGAGAAGGAGAACAATGAGCTTGGTGAAGCTCTTGGTGGTTTGAGAAGTGAAGAGGGACATTGTGGGGTTCCTGAGAATGAAGTTGGCTTTTCTAGCTATGGAGACCAAGGTTTGGTTGATGATCATGTTGTTGTTGAAGTTGTGGAAAGTAGTGTCTTTGAGACCAAGGTTTCTGTTCTGAGCGAAAATGATTGTCGAGTTTTGGTTGGTTCTGAAAAGAATGAGGTGTCCTCTTTGTTGAAAATGGGTGAAATTGATAAAAGCACGGTGCTTTCTCATGAGGGTGCTGAGAAGTTGGATAGTGCTTGTGCTTCTGAGAGAAAAGTAGCTGAAGATGCCGTTTTGAGTGAGGATGGTTTGGTAGGGGTTGGTGGGGAAGACAAAATAGAAGGGAAGAAAATTGAGGAGGAAGAAAAGGATGTAGATTGTGATGGGAAAGTTGTTACTATAGAGGTTCCAATAGTAGAGACAAGTGAAAACATTGATGTAGAAGTGGAGGATTTGAGTGATGAAGGGTATGGATTTTCAGTTGGTGATTTTGTTTGGGGTAAAATTAAGAGTCATCCTTGGTGGCCTGGCCGAGTTTTTGATCCATCTGATGCATCAGAATTTGCTTTGAAGCTGAAACAAAAGAATAGACTCCTAGTGACCTGCTTTGGGGATGGAACCTTTGCTTGGTGCCATCCATCACAATTAAAGCCTTTTGAGGAGAACTTTGATGATATGGTGAAACAAAGTGACTCCAAAGCTTTTGTCAATGCTGTGAAAGAAGCTTTAAATGAGATAGGAAGGCTTTTGAATATGAAGATGAGTCATTCATTTGCTGTGAAGAAAACTACTTCTGAATTCACTCCACCATTATTGGCAAAGAATTCTGGAATCAAGGATGGAGTTCTTGTGCCTGAAAGTGGCATAGAGAGACTTTCAACTGTTCTAATTGAACCAGCAGAATTACTTTCTAGAGTGAAACAAATGGCAGAAACTGTTGATATTGCTAGTATTCTGGAGCTGGAGTTATTAAAGGTTTGGCTTTCAGCCTTTTATCTATCGAGAGGAGGTTGCAAGTTACTTGATTATGAGGATCCCCAACCAATTCCTGGACTTGAAGATAGCCGCCATCTAAGGGTTGAAACAGTTGATGTAGGTGACATTAAGAGTGCAGTGGAAGCACCATTCCAAGGGCCATTTGAAGAGGATTACACTACATTGCCAGCGAACCCAGAATTTGGTGAACCATATCATTCTCTGGGGCTTTCAGGAAATAAATTGACCCATTCAAGAAAGCAGAAAAGCATTGCTGAAATTATGGGGGAGGACAAAGATGTTCCTGCCAAAAATAGGAAGGGGGATGCAACTAATGAAGTGGTGGATGCAGTTCGGTCAAGTGGTAAAAAGAAGAGAAAATGTAGTGAGGATTCAATGGCACCTAAATCAGTTCAGAAGAGAAAAGCATTGCTTCAAAATCTGGTAAGTGCTGACAATGATGACAGTGGGGGCAAGGAAAACAGTGACAAGGAGCAAAAAGAAGCTTTTGGCAATGGAAACATTAGCAGTGGGATCATAAATGAAACTGATGAAGGGAAGACCAAAGAACAGAATGGGAAGGGTTCTTTGTCAAGAGAAAGGAAGAAAAGTAAGTACTTGTCCCCTCCCTTTACGACTCCAATCAGAGGGCTAATGGAGGGAAATATAGAAACAGATTCCCTTAAAGTATCCAGCAAAGCTCGAGTATCAAAAGGAATGGCTAGGGATGCTGGCCAGCTTTCTCCTCCCGTTTGGAAGTGTAATGGTGATGCATTTCATGAGAATTCATCCAAGGAAGTTGCCATAGAGTGGGAGCTTTCTGATGGCTCAAATTACCAGACTCAAGTAGATGATGAGAACAAGATTATTGATCCAAAGAAAATCCAGGCTTCTTCAGGGGAAGTTCTGTCCAATGTCCGCGTTGCAGCTATGAGTCCACAAATTCCTACAGAAAACACTTCTCTTGATAAATTTGTGGACTTTATTTATGTTTTCAGAAGTTCATTATATCGCCAAGGATCATTATACAAAGTATACAAGAAACATAAGCCAGGAAGGAAGAGAAAGAAGCCAGAATCTGAACTTGGGATGCTGAGGAAAGATCAAAATCAATCTGATCATGTATCACCTAATCAAGATTCTGAACCAAGGAAGAGAAGAAAGGAGACAACTTCAAGCATGTCAAAAGTGAAGGGAGCTTCTGAAACTGAGACTGGCACGAAGGGTACCAATGAAAAAGCTTCAGCTGCTGTGCTTTTTGTGTCATTTTGGCCAGGATCAACTCTGCCTTCAAAATCTGATCTTATCACATTGTATGGTAAGTTTGGAGATCTGAATGAAGCAGAAACAGATATGTTCTACACTAATTACACTGCTCGAGTTTCCTTCATAAGAGCTTGTGATGCAGAAAAGGCATTAGACCATTCAAAAAACATGAACCCCTTTGAATCTTCTGAGGTCACTTTCCAACTCCAGTACCTTTCTGCTGGATCCAAGTCTGGAGAACATGGTATAAGATCAAAGTCCAAAGCCAAGAAGAAAGGTGAGACTCAGAGTAGCGTAGCATCTAATTTGAGCTTCATTAAACTTAAACTTCAAGGTCTGACCTCAATGCTAGAATCATCAGATGGAAAATCACCTGATTTGAAGACAAAATTAGAGAGTGAGGTGAAAGGTCTTTTGGAGGATGTGAACAAAATGGTTGAATCTTCTTTGTCCTAA 2826 0.4091 MGMVETQSKEPSWGSSPLVEKANIQGSEKENNELGEALGGLRSEEGHCGVPENEVGFSSYGDQGLVDDHVVVEVVESSVFETKVSVLSENDCRVLVGSEKNEVSSLLKMGEIDKSTVLSHEGAEKLDSACASERKVAEDAVLSEDGLVGVGGEDKIEGKKIEEEEKDVDCDGKVVTIEVPIVETSENIDVEVEDLSDEGYGFSVGDFVWGKIKSHPWWPGRVFDPSDASEFALKLKQKNRLLVTCFGDGTFAWCHPSQLKPFEENFDDMVKQSDSKAFVNAVKEALNEIGRLLNMKMSHSFAVKKTTSEFTPPLLAKNSGIKDGVLVPESGIERLSTVLIEPAELLSRVKQMAETVDIASILELELLKVWLSAFYLSRGGCKLLDYEDPQPIPGLEDSRHLRVETVDVGDIKSAVEAPFQGPFEEDYTTLPANPEFGEPYHSLGLSGNKLTHSRKQKSIAEIMGEDKDVPAKNRKGDATNEVVDAVRSSGKKKRKCSEDSMAPKSVQKRKALLQNLVSADNDDSGGKENSDKEQKEAFGNGNISSGIINETDEGKTKEQNGKGSLSRERKKSKYLSPPFTTPIRGLMEGNIETDSLKVSSKARVSKGMARDAGQLSPPVWKCNGDAFHENSSKEVAIEWELSDGSNYQTQVDDENKIIDPKKIQASSGEVLSNVRVAAMSPQIPTENTSLDKFVDFIYVFRSSLYRQGSLYKVYKKHKPGRKRKKPESELGMLRKDQNQSDHVSPNQDSEPRKRRKETTSSMSKVKGASETETGTKGTNEKASAAVLFVSFWPGSTLPSKSDLITLYGKFGDLNEAETDMFYTNYTARVSFIRACDAEKALDHSKNMNPFESSEVTFQLQYLSAGSKSGEHGIRSKSKAKKKGETQSSVASNLSFIKLKLQGLTSMLESSDGKSPDLKTKLESEVKGLLEDVNKMVESSLS* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02230 941 MobiDBLite consensus disorder prediction 536 550 - -
Rops5g02230 941 MobiDBLite consensus disorder prediction 1 22 - -
Rops5g02230 941 CDD PWWP 205 288 - -
Rops5g02230 941 MobiDBLite consensus disorder prediction 551 574 - -
Rops5g02230 941 MobiDBLite consensus disorder prediction 462 505 - -
Rops5g02230 941 ProSiteProfiles PWWP domain profile. 204 265 IPR000313 -
Rops5g02230 941 SMART PWWP_4 202 263 IPR000313 -
Rops5g02230 941 SUPERFAMILY Tudor/PWWP/MBT 198 302 - -
Rops5g02230 941 MobiDBLite consensus disorder prediction 1 46 - -
Rops5g02230 941 Pfam PWWP domain 205 288 IPR000313 -
Rops5g02230 941 MobiDBLite consensus disorder prediction 716 777 - -
Rops5g02230 941 MobiDBLite consensus disorder prediction 462 585 - -
Rops5g02230 941 MobiDBLite consensus disorder prediction 762 777 - -
Rops5g02230 941 Gene3D - 193 298 - -
Rops5g02230 941 PANTHER ALDOLASE-RELATED 68 879 - -
Rops5g02230 941 MobiDBLite consensus disorder prediction 746 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02230 Rops-Chr5 48588739 48592236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02230 - - cam:101494530 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g02230 5 48588739 48592236 Rops5g02230 5 48588739 48592236 ECH