Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01347 ATGGAATTCTTCCTCAAGGCCAAAGTGGTGCGCCTGAGGAGTTACCATGACAAATACATGTTGGCACATGAAGATCAAGAAACGGTGTACCAAGACCGTAATGGGTGTTACAATAATGCAAAATGGACAGTGGAGATTGTAGAGAATGCAGATGTGATAAGGTTGAAGAGTTGTTATGGGAAATATTTAACAGCCTCTAATATGCCATTCCTATTGAGAAGCACAGGCAAGAAAGTGTTGCAAACTTTGCCAAGAAGGTTAGATTCATCTGTGGAATGGGAACCAATGAGAGATGGGGTTCAAGTTAGGCTAAGGACACGTTATGGACAATATCTTCGTGGTAATGGAGGATTACCACCTTGGAGGAACACCATCACACATGATGTCCCACGTGCACATAGGACTGCAACAGCTAATTGGGTTTTGTGGGATGTGGACATTGTGGAACTTAGACCTCAAACACAAGCTCCAAAACCAAGACCAAGGCCTACACCTATAACACCACCTAATCGTTCTTTGAATCCAACCCCAATAGAACTTTCTCCTATTCCTTCTCCCTCACAAGCAGATCTTGTCAAGATTGATCTCAGGTCTCCTACAACACCCGAGAGTGAAGATTCAGATGAGTGTCCATCACCAATGAAAGAGGGAAGGATTATATTTTATGATGTGGGGGATGAAAATGGTGATGTTGATGATGCAAAAAAAGGGGCATTCTTTACCTTTAAAGGAAGTTGTGTGAATGACTTAAAGGATAAGTTGAAGGAGGAAATAGGACTTGATGATATTACTATGTGTTGCCGCAACCCATTGACTGCGAAACTTTATCCCCTTCGTTTACAATTACCTCCTAACAATACTGACATGCATGTTGTTGTGGTTCCTTCCTCATTCAAAGACCAATGA 906 0.4194 MEFFLKAKVVRLRSYHDKYMLAHEDQETVYQDRNGCYNNAKWTVEIVENADVIRLKSCYGKYLTASNMPFLLRSTGKKVLQTLPRRLDSSVEWEPMRDGVQVRLRTRYGQYLRGNGGLPPWRNTITHDVPRAHRTATANWVLWDVDIVELRPQTQAPKPRPRPTPITPPNRSLNPTPIELSPIPSPSQADLVKIDLRSPTTPESEDSDECPSPMKEGRIIFYDVGDENGDVDDAKKGAFFTFKGSCVNDLKDKLKEEIGLDDITMCCRNPLTAKLYPLRLQLPPNNTDMHVVVVPSSFKDQ* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01347 301 Gene3D - 9 147 - -
Rops5g01347 301 MobiDBLite consensus disorder prediction 152 188 - -
Rops5g01347 301 FunFam BnaC05g19630D protein 5 146 - -
Rops5g01347 301 SUPERFAMILY Actin-crosslinking proteins 5 147 IPR008999 -
Rops5g01347 301 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 297 - -
Rops5g01347 301 MobiDBLite consensus disorder prediction 156 172 - -
Rops5g01347 301 Pfam Domain of unknown function (DUF569) 1 143 IPR007679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01347 Rops-Chr5 28107177 28110344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01347 - - gmx:100775673 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01347 5 28107177 28110344 Rops8g00751 8 15552532 15555948 PCT