Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01299 ATGGAGAGTTCTGAGAAGGTGGTTGCTGTGATCATGGTGGGTGGACCCACTAAAGGGACCAGATTTAGGCCTCTTTCATTCAATACTCCAAAACCCCTTTTTCCTTTGGCTGGCCAGTCAATGGTTCAGCATCCTATTTCTGCTTGTAAAAGGATACCCAATTTGGCTCAAATATATCTTATTGGATTCTATGAGGAGCGAGAGTTTGCTTTGTATGTCTCTTCAATTTCGAATGAGCTGAAGTTACCAGTAAGATATATGAAGGAGGATAAACCACATGGTTCAGCAGGTGGCCTATACTACTTCAGAGATATTATCATGGAAGACAGCCCATCACATATCTTTCTGCTAAATTGTGATGTTTGCAGCAGTTTTCCATTGTCATCCATGCTTGATGCGCATAAAAGATATGGTGGGATGGGGACAATGTTGGTAATCAAGGTTTCAGCTGAATCTGCTAACCAGTTCGGTGAGTTGGTTGCTGATCCAACCACTAATGAATTGCTGCATTATACTGAGAAACCTGAGACCTTTGTTAGCGATTTGATAAATTGTGGTGTCTACATTTTCACTCCTGATATTTTCACTGCCATCCAAGACGTATCAATGAACCGGGAAGGGAGAGCTAATCTGCGACGTCTCTCCAGCTTTGAAGCACTCCAATCTACCACAAGGACAATTCCTACAGATTTTGTAAGACTGGATCAAGATATACTATCACCTCTAGCCGGAAAAAAGCTACTGTATACATACGAGACAACGGATTTCTGGGAGCAAATTAAAACACCAGGAATGTCTTTGAAATGCTCGGAGTTGTATCTTGCTCAATTCCGGTATACTTCACCCCATCTTTTGGCCAGTGGAGATGGCAAAAAGAATGCTAAAATTGTTGGTGATGTATATATTCATCCATCTGTGAAAGTTCATCCATCTGCAAAGATTGGTCCCAACGTTTCTATTTCGGCAAATGTTCGTGTAGGTGCTGGCGTCAGGTTAATTAGTTGTATCATCTTGGATGATGTTGAAATTAAGGAAAATGCTGTAGTTATAAATTCTATTGTTGGATGGAAGTCATCACTCGGAAGATGGTCACGTGTGCAGGCTGATGGTGACTACAATGCAAAGCTTGGCATAACCATCCTAGGAGAAGCTGTGCAAGTTGAAGATGAGGTGGTGGTGGTCAACAGCATTGTTCTTCCCCATAAGACTCTTAATGTCAGTGTGCAAGAAGAAATCATCTTATAA 1245 0.4153 MESSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQSMVQHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKLPVRYMKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCSSFPLSSMLDAHKRYGGMGTMLVIKVSAESANQFGELVADPTTNELLHYTEKPETFVSDLINCGVYIFTPDIFTAIQDVSMNREGRANLRRLSSFEALQSTTRTIPTDFVRLDQDILSPLAGKKLLYTYETTDFWEQIKTPGMSLKCSELYLAQFRYTSPHLLASGDGKKNAKIVGDVYIHPSVKVHPSAKIGPNVSISANVRVGAGVRLISCIILDDVEIKENAVVINSIVGWKSSLGRWSRVQADGDYNAKLGITILGEAVQVEDEVVVVNSIVLPHKTLNVSVQEEIIL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01299 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 414 - -
Rops5g01299 414 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Rops5g01299 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Rops5g01299 414 Gene3D Hexapeptide repeat proteins 286 411 - -
Rops5g01299 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Rops5g01299 414 Pfam Nucleotidyl transferase 9 211 IPR005835 GO:0009058
Rops5g01299 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Rops5g01299 414 FunFam Putative GDP-mannose pyrophosphorylase 283 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01299 Rops-Chr5 27320471 27325187 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01299 K00966 - mnt:21393802 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01299 5 27320471 27325187 Rops5g01299 5 27320471 27325187 ECH