Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01137 ATGAAGCGAAGATCACCACACCACCAACAGAGAACTTGGGCTGAAATATGTTGTTCTGGTTGGTCCTGCATACAGCTCTTCTGGGCAAGGGTGGTCGTGCGTAAATGGCTTAACATGGGAAGCAATGAGTCTGATTACAGTGCTGACCCTGATGATGATGATGAATATGATTCTGAAAGTGAAGTAGACAATGAAGAGTGGGGAAGACGGCCGCCGTTTATGGACAACAGAGGTGATGAAGCTCCAACTGAATCAAATGAATTCCTTCCAAGGTTAAGGAGACAAAAGTCATCAACTTTTAGATCTCAGTATATAAACACGAAGGAACTGAGGGTATGTGCTGGGACATGGAATGTTGGAGGAAAACTTCCACCTGATGACCTAGATATTGATGATTGGCTTGGTGTCAATGAACCGGCTGACATCTATGTCCTTGGTCTTCAAGAGATTGTACCCTTAAACCCTGTTAACATTTTTGGTGCGGAAGATACTCGTCCTGTTCTGAAATGGGAGAATATTATTCGGGAAACTCTTGATAGAGTTCGACCTGCAGTACCAAAGATAAAATGCTTCAGTGACCCTCCATCTCCATCAAAATTTAAGCCATCAGATTCAGATGATGCCCCTGATATAGAAGAAGAATTATTATTTGAAAGTGATAGTGACATTGGTGAGGAAGTCCATCCTTTGGATGAAGAACATAATATTTGTAATGGAGGTACTAATGGAATGACCACGGATGAAGTCATGAATAAAAATTTATTGGCTTCTGATGTTGCTGATAGTGCCAAATCTGGTGCGCCGGTTGACATTGATTTCCGGAGACAGTTTTCTTTTCCAAAGAGGTTTCATAGGCTACAAGGTTCATCAGAAGACATGGATGCATCATTTTCCCAACAAACCACTAAACTAACCAGAATGCTAAGTGGGTCTGAAAGGATTGGTTTGAGCTGGCCAGAGCCTCCCCTGCATCTGCTATCCCAGCAAGTTTTGGAGAGACCAACTTCTTTTAAATCAGTCAAATCCTTTAAATCATCAAAATCGTTCAAAACATATAATTCTTTCAAGTCAATTATGGGTGAAATACCAGTTTTGCTTCCTGAAATTGACCTTGAAGCTTTAATGAAGCGGAAAAGAAGATCATCATATGTGAGGATTGTGAGCAAGCAGATGGTTGGAATTTTCATCACCATATGGGTTCGTCGGAGCTTGCGTAAACATATTCAGAACTTAAAGGTTTCAACTGTTGGTGTTGGTGTCATGGGCTATATTGGTAACAAGGGATCAATATCTGTCAGCATGTCCATATATCAGACGCTATTTTGTTTTATATGCTCCCACCTTACGTCTGGTGAAAAGGAAGGAGATGAGCTTAAAAGAAATGCTGATGTTCATGAAATACTTCGTAGAACCCATTTTCAGTCACTTTCTTATATTGGACTTCCCAAAAGAATCCTTGATCACGAAAGAATAATTTGGTTGGGGGATCTGAATTACCGTATCAACTTATCAAATGTGGAAACAAGAGCTCTTATCTCAAAACAGCAGTGGTCAAAATTGGTTGAGAAAGACCAGCTCATACGAGAACTCAAAAACGGTGCATTTGGAGGATGGTCAGAAGGCATGTTAAACTTCCCACCAACTTATAAATATGAGGTTAATTCAGATAAGTACTATGGAGAGGATCCCAAGGTTGGAAAGCGTACACCAGCATGGTGTGATCGTATTCTTTCGTATGGCAAGGGAATGAGATTACTGAGTTACCGAAGGGCTGAGCTCAAACTGTCAGATCACAGACCCGTAACTGCCACATATATGGTTGAGGTTGAGGCGTTCTCTCCTAGGAAGCTACAGAGAGCCCTAACTTTCACTGATGCAGAGATTGAAAATGAAGAAGTCATAAAAAATTAA 1911 0.4087 MKRRSPHHQQRTWAEICCSGWSCIQLFWARVVVRKWLNMGSNESDYSADPDDDDEYDSESEVDNEEWGRRPPFMDNRGDEAPTESNEFLPRLRRQKSSTFRSQYINTKELRVCAGTWNVGGKLPPDDLDIDDWLGVNEPADIYVLGLQEIVPLNPVNIFGAEDTRPVLKWENIIRETLDRVRPAVPKIKCFSDPPSPSKFKPSDSDDAPDIEEELLFESDSDIGEEVHPLDEEHNICNGGTNGMTTDEVMNKNLLASDVADSAKSGAPVDIDFRRQFSFPKRFHRLQGSSEDMDASFSQQTTKLTRMLSGSERIGLSWPEPPLHLLSQQVLERPTSFKSVKSFKSSKSFKTYNSFKSIMGEIPVLLPEIDLEALMKRKRRSSYVRIVSKQMVGIFITIWVRRSLRKHIQNLKVSTVGVGVMGYIGNKGSISVSMSIYQTLFCFICSHLTSGEKEGDELKRNADVHEILRRTHFQSLSYIGLPKRILDHERIIWLGDLNYRINLSNVETRALISKQQWSKLVEKDQLIRELKNGAFGGWSEGMLNFPPTYKYEVNSDKYYGEDPKVGKRTPAWCDRILSYGKGMRLLSYRRAELKLSDHRPVTATYMVEVEAFSPRKLQRALTFTDAEIENEEVIKN* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01137 636 MobiDBLite consensus disorder prediction 63 89 - -
Rops5g01137 636 SUPERFAMILY DNase I-like 92 623 IPR036691 -
Rops5g01137 636 FunFam type IV inositol polyphosphate 5-phosphatase 3 338 636 - -
Rops5g01137 636 MobiDBLite consensus disorder prediction 42 89 - -
Rops5g01137 636 MobiDBLite consensus disorder prediction 46 62 - -
Rops5g01137 636 SMART i5p_5 300 613 IPR000300 GO:0016791|GO:0046856
Rops5g01137 636 FunFam Type I inositol polyphosphate 5-phosphatase 1 91 194 - -
Rops5g01137 636 Gene3D Endonuclease/exonuclease/phosphatase 90 194 IPR036691 -
Rops5g01137 636 Gene3D Endonuclease/exonuclease/phosphatase 325 634 IPR036691 -
Rops5g01137 636 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 32 628 IPR045849 GO:0004445
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01137 Rops-Chr5 23511014 23533106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01137 381 609 Acyl Lipid Metabolism Gene Families AT1G65580 31.985 3.81e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01137 - - gmx:100811025 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01137 5 23511014 23533106 Rops5g01137 5 23511014 23533106 ECH