Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01127 ATGTCTGTGACATCTTCAATCCCATGCATCAATATCCCAACACGTTCCTCTTCACCATCTTGTACTTCTTCATCAACATCATCGTCCTATTGTTTTAGGTTCTCTTCTTCTTCCAAGTCTCACAGTGTAACCATAAGGAATTCTCAGGCTGAAGGGCCTCTTAGAAGACCAGTGGCTCCTCCACTAAGAGAACCATCATCATCATCTAGTGCCCTTCAGCCCCCTCAGCCTCCATCATCTCCTACTGTGGTGCCTCCTCCAAAGAAGTCAAATGCTGTTGTTGGTGATGATAAGAATGTTATTACATTAGAGTTTCGAAGGCAAAAGGCTAAGGAGTTGCAGGTATACTTCAAACAGAAGAAACTTGAAGAAGCAGATCAGGGTCCTTTGTTTGGTTTCATTGGGCAGAATGAGAATAACAATGGGAGATGGGCTATGTTTGGTTTTGCTGTAGGGTTGCTAACAGAGTTTGCAACAGGCTCAGACTTTGTTGATCAAGTAAAGGTACTTCTCTCAAATTTTGGGATAATAGATTTAGAATGA 543 0.4217 MSVTSSIPCINIPTRSSSPSCTSSSTSSSYCFRFSSSSKSHSVTIRNSQAEGPLRRPVAPPLREPSSSSSALQPPQPPSSPTVVPPPKKSNAVVGDDKNVITLEFRRQKAKELQVYFKQKKLEEADQGPLFGFIGQNENNNGRWAMFGFAVGLLTEFATGSDFVDQVKVLLSNFGIIDLE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01127 180 MobiDBLite consensus disorder prediction 14 49 - -
Rops5g01127 180 MobiDBLite consensus disorder prediction 14 91 - -
Rops5g01127 180 SUPERFAMILY Chlorophyll a-b binding protein 127 169 - -
Rops5g01127 180 PANTHER OS02G0610700 PROTEIN 18 173 - -
Rops5g01127 180 MobiDBLite consensus disorder prediction 71 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01127 Rops-Chr5 23277792 23286464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01127 - - cave:132184352 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01127 5 23277792 23286464 Rops5g01127 5 23277792 23286464 ECH
Rops5g01127 5 23277792 23286464 Rops6g02569 6 46322758 46325890 PCT