Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01109 ATGGATTCACATGCACTGCGTTTACGGTATCCATTCATGATAAGCAACAATTTCAACACCTGCAAAACACTCTCTTTCTGTAACACCCTTCGCTCTCTCTCCTCCACCAATCCACTTCGCGGTCGCACCTGGTTGAAGCTGGAAGCCACCAGCAAGAACAAGGTCTTCGACGAGGCTGCTTTCGAGGCAGAGAGGCTCGCCCTCGACGCCGAAGCCCGCCAAGCCATGGCGGCGGCGGAGGCTTCCCTCCGGGATGACCCGAAAGCATGGAAATGGGTCATCCGAAAGCGAATTTGGGATGCGATGGAAGCCCACAACTTCGCTCAAAACCCGCGACCCGTTCACCATCGGATTCCCAATTTCGTTGGCGCTTCGGTTGCCGCTGAAAAGATGAGGGAGCTAGATGTGTTTCGGGCTGCACAATGTGTGAAGGTTAATCCAGATTCTCCTCAGAAACAAGTCAGGTTTTTCACTCTCTCAGATGGAAAGAAGTTGTTAACTCCTCAGCCACGGCTGAGAACAGGTTTTTTCTCTGTACTTGAATCTGATATGTTAACTTCGGGTACCATCAAGGAAGCCTGCACTTCTGTTGGGGTTGCCAAGCATGGACGGCCAATTGGGTTAGATGAAAAGATAAAGGTAGATCTTATCGTTATTGGATCTGTTGCTGTTGACCCGAGGACAGGTGCTCGATTGGGGAAGGGAGAGGGATTTGCAGAACTTGAATATGGCATGCTACGGTACATGGGAGCCATCGACGATTCAACACCAATTGTTACATCTGTGCATGACTGCCAGTTGGTGGACGATATTCCAGTTGAAAAACTGTTAATCCACGATGTACCAGTGGATATCATTTGTACTCAAACCCAGGTCATATACACACACACGTCTATTCCAAAGCCTCAAGGAATTTATTGGGACAAATTGTCCCCTGAGAAGCTGGGACAAATTCGTATACTTAGAGAGCTCAAGAAGAGGATTGAAAGAGAAACTGGACAGAAGCTTCCTACTGGTCCATCAGAGAAATTACCTCCAACTGCTCAACGAAGTCGAAGAAGGGGTTAA 1068 0.485 MDSHALRLRYPFMISNNFNTCKTLSFCNTLRSLSSTNPLRGRTWLKLEATSKNKVFDEAAFEAERLALDAEARQAMAAAEASLRDDPKAWKWVIRKRIWDAMEAHNFAQNPRPVHHRIPNFVGASVAAEKMRELDVFRAAQCVKVNPDSPQKQVRFFTLSDGKKLLTPQPRLRTGFFSVLESDMLTSGTIKEACTSVGVAKHGRPIGLDEKIKVDLIVIGSVAVDPRTGARLGKGEGFAELEYGMLRYMGAIDDSTPIVTSVHDCQLVDDIPVEKLLIHDVPVDIICTQTQVIYTHTSIPKPQGIYWDKLSPEKLGQIRILRELKKRIERETGQKLPTGPSEKLPPTAQRSRRRG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01109 355 PANTHER 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED 76 353 IPR002698 -
Rops5g01109 355 SUPERFAMILY NagB/RpiA/CoA transferase-like 90 308 IPR037171 -
Rops5g01109 355 FunFam 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 122 298 - -
Rops5g01109 355 Gene3D - 59 298 IPR024185 -
Rops5g01109 355 MobiDBLite consensus disorder prediction 329 355 - -
Rops5g01109 355 Pfam 5-formyltetrahydrofolate cyclo-ligase family 91 288 IPR002698 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01109 K01934 - gmx:100797707 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01109 5 22758703 22763025 Rops5g01109 5 22758703 22763025 ECH