Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01070 ATGGAGCTGGAATTGGGACTCAAAATCATCAAAACTAGAGATGACATTGATTCCCTCTCTGAGTATCAATTAGCCAAGGACAAAGCAGGACCAGTCTTCAAGTCTAGAGAAACAAACACCATGTTCATCCTCACAGGCTATCTTAAAGGTTATAAGAAGAATACCATTGACATCAAGATTAGTGAAGATGGTAGTAAGATATTAATCAGTGGAAAGAAGCCAATTCAGGAAATGTTGATTATGGGATGGGTAATGCACAGGAAAGATGTTGAAATTAGAGGGTTCAAAAAGGTTTTCAAAATTCCTGATGGGGTGATTTTGGATAGGATCAAAGCAAAGTATGATGATGAGGAATGGATTTTGAATATTTTCATGCCAAAATTGGTAAAAGGAATTAGTGGGGCTAGGATAGAAGAGATCAAGGAAGAAGAATCTGAAAGAGGGAGATTAGAACAAGAGAAAAGTGAAACTGATCATGTTCTAAGGAGTGTTGGAGAGACAAGCCAAAAAGGATCTAAAGAGTCTGAAGTTCAAGAAATGGAGGATAGTAAAAGTGTGATGGAGAAGAAGGAAGGAGAAGTATCTGACAAGATGCTTGACAATGCCAATACGGAAAAAAATAAAGAAACAATAGAAAAAGAAGTAGAAGAGTCTACGTTGAGAATTGAAGATGAAAATGGAGAAAGAAAGAAGGTAAAGGTTGGCAAGGAAGGATATGAAATAATGAAGACATCAGAAGAAGAGAAAAATGTTGGTGTACATATCTCTCAGAAAGATGCTGATACAAGCCATGATCAAGTGTCCGAGGTTAAGAGAATGAAGGATAGTAAGAATGTTGAGAAGGAAGGAGGGATATCTGACAAGATGCTTAATGATTCCAATAGGAACATGCTTGGAGAGATGATCCAAAAAGAAATAGAAGAATCTGAGTTAGGAGTTGAGGATGGAGATGGAGAAAAATGGAAAGAAAAGGTTGGGAAAGAAGGACGCGAAGCAATGAAGACATCAGAGCTAGAGCAAAATGTAGGTGAACATATCACACAGATCATTGGAGATACTAGCCAAGGAGATTCTAAAGAGCCTATGATTCAACAAATGGGAGAAGCTAAAAGCACTGTTGAGAAGATGGAGAGAGAAGAATCTGGAAAGATACTTGTTAAGGCCAATGAGTTTGGGAAGACATCAGAACTTGATCAAAATGTAGCTGACCATATTCCTAGCAACATTGATGGTATAAGTGAAGAAGAATTTAAACAGTCCAAGATTCAACAAATGGAGAAAACTGAAAGCATTGAATGGAAGATGGGTAGAGGGGAATCTGAAAGGAAGCCAGTTGAAGCCAAAAAGGATATTCACAAAACCATATCTGGAGATACCATCCAAAAGGACATCAAAAAGCCTAAGACTGAAACAAAGGATGAAAATAAAAAATGTGTTAGTGAAAAGGATGGCAAGAAAGGAGTTGATGCAATGACTATAAGACAAGAGTCTCCTAAGCAGTTACCAAAAGCTGCTCTTGAGGAAAGGGAAGGATTGAATGTTCCAAAGATGCAAAAAACTGAAGATGTCAAAGAAGAAATGGTGGAAAGAAAGGGCAAAGAGGTTGAATATTTTGTGAAGAAGGGTGAAGGTAAAGGAACCAAAAGGATGCACGTGGAAGCAAAGAAAGACATAATAAAAAAGAAAATACAAGAGGAAATTGAAAAGACTAAGAATGAAATTAAGGATAGTGGTGAACAACATGTATTGGAGAATACTGTTAGAGAAGGAATGGCTGAAACTGGAAGTTCAATGGAGAAGGTGGAAGGAGAAGAGTCCAAGAAGAGAACTAAGGAAGCAAGCTGGGTTACTGAGAAAAGTTCAGTAACAGAGACCTTGCAAAAGGAAACTGAGGTCTATAACATTGAAAGAAAGGCCAGAGATGAACAAGAAAAGCTTCCCAAGCAGATGGTGGAGGCAATTGCCCAAGATGAGGATAAAACTGAATATGGTGATGTAAATTTGAAAGAAGAGGGATCTACAAAGATGCATATTGAACCAAATGAGGTTTTTGAGGAAGAGACAACTGGGGACAGAATTGAAAAGGAAATTAGTAAGCAAAAACTTGAATCTAGTGATTCACTAAGAGGGAAAGAGAATGCTGATCATGGAGGATCTGATGGAAGCAAAAGACAAAAATCTCCAGAGATGGGGGAAAATGAAGATGTCAAAAAAGAGGGTGCAAAAATTGCACAAGTTATAAAGAGAGTAAAAGGAGAGAAACATGAAAAGATGCAAGTTGAAGCAAATGGAGGTTTGAAGAATGATATAACTAGGAAGACAACAGGGAAAGAAACAGAGGAGCCTAAGATTCTAATTAAGGAAAAAGATCAACAATGTTTGCAAGAAGAGGTGAGTAAAGGAAGAAATGAAGCAAGCACAACAGCAGGAGAGTCTCCTATGCGAATAGTAGATTCACTTGCAAAGACAAGAGAGGGACCAAAGGATAAAGAGATAGAATCAGCAGAAGAGATCAAAGAAGAAGTGGCCAAAAGAAAGAGTAAGGAAACAAAAGTTATTGAGTCTACACCAAAGGAAAAAATTCTAGAGTATGAGGGTGAAAGAATTACACAGACTTTGCATCAAGTACCAGAGGAAAAACATCCAAAAGCATTAGAGATAGGAACTCCGGAAAGAGAATTGCAACCTGCAAATGGCCCAACTACATGTGAAGTAGCAGCAAGTGTGGGATTTAAGGAGGTTGAACAAGGGAGTGCAAAAGATAAGACACAGAAGACAGAGATGCTACCTCCAAAAATTCAAAGCAAGGAAACTCATGACTCAAAAAATGAAAGTGTGAACCAAGATATTTTAAAGCCAGAGAAAACAAAAGAAGTAGAGAGAGAACAATGCACTCATGACACAGAAAGCACTAAACAGGTTGCAACCATAGAAGATCAAGTGGCTAAACCATTATCAGCACCAAGGTTTCCAGCAATTCAACAATCCAAAGCTGAAGAAAAAGATAAATTATATGATGAAGGCAGCAAAGAAAAATGCAAAGCATCTCTAGAATCAAGAAAGGAAGATCCTCCAAAAGATAAGCAAAATTTAATTGAAATGAAGGAGAACCAAGAAGCTAAACAAATGGAAACTTTGAAGCCAGAAATTCCTCTAGAAAAAGGAGGACAAGTCATTCTAAAAGATGAATTTCAAAAAGGACAAAAAGAAGGGGAGACTATGCTAGAGAAAACAGAATGGCCTAAGAAAAAATTCGATGATAGAGATCAACAATTTGTACAAAGAGATGTAGGCAAAGGAGTTGGAAATGTAGAGACTATAGGAATGGAGATGCCCAAAGAAGAATGTGTAGCAGATGCTGGTACACTAGCTGAAAGGATTGAAACCAAAAGAGACTTGAAAGCATCACTTGAAAGAGAGGAATACAAAACAACTCAAAATGTTAATGATGAGAAGCCCAGGATAGAGGAAGAAATTCGAAAAGCTGATATTGGAAAGGTGGATGATAAAGCTAAATACTTTGAGGAGTCAATGAAAACAACACAAGAGAAAGAGCTTCCTATAAGTGTAACAAGTATGGAAGTTGAAGAGGCAGTGCCAAAGAATGAGATCAAAGAGCTAAACCAGAAAGAGTTGTCACCTCTAACAGCAGAAATGAAAAGCAAAGAGCCTCTCGAATTAGAAAAGTCGATTATGGAATGGAAATTTCCAAAGACAAAAGAGTACGTACCTGTACCAAAATCAGAAGACATCAAAGCACCAAAAATTGCAGCATATCAAGGAGCTAAACCATCAACATTGCAAAGGCCAACATTAATTCAACAATCCATAGATGAAGAAAATAGAAAATCAGAAAATGTTGTTGAAGCACATGAAGCAACCAGGGAATCACCAAAGAAAGACATTGAAGAAAATGAAGAAATGGGAAGTTTGCAGCCACAGGTCCATGAAGAAAATCAATGCTTTGAAGAAGAACAAAAATTTGATTGGCAAGAAGAAGCACTTGATCAGTATGGGTTTCAAGGTCCTAAGATTTTAACTGAGGATAGAGGTCAACAATATGCTCAAGAGAGCAATGATAAGAAAGGATATCAAACAAGAGATGCTGTAGAAGAAGAGTCGTTGAAACGAGAACATAGAGAAGAAATGGTTCTCGAGAAAAGGGAGGGACCAAAGGTTGCAAAGAGTGGAGAAGGTAATGAGGCTTCTAGACAACTACTCAAAAGAGAAAAGGGAGAAACAAAAACTGCAGATGAAAAGCATAAAATGAAGGAAATAACCCCAGAGCTTGAAAAGGCTAATGGATTCGAACAGGTTGCAGAAAAAATGCATGCAACTCGAGATAGAGAACATCAAAGAGAACCAGAAGAAATCACTTCTAAAATGGGGGTGGAACCTCCAACAACAATTGAAATAACTCCAAACAAAGGAATTGAAAATAAAGAGCCTCGTGAATTATCATGGCCAAGCATGGATTATGAAAGTCCAAAGATAGAGGAAGTAGAACAAGAAAAGGAGAAGGAAAGGCACATTCATGCACTAGAAGCAACCGTTTCTAAAGAAGAAGGACTTGCACAAGCTACAGCAACACATTCAAAACCAAAAGGTGACATCGATGAGCCACAAGTAAATCAACTGCCATCCCCATTGAGCAAAGAGCCACGTGAATTAGATAAGTTTAGTACAAAAGAAGATGATTCGAAGGTAGAGAGTTTAGTACAAGTGGGGGAGAGAAAAGAATCAATTCATTCTATAGAAGACACTGCAGCATCTGAAGTAGTAGCAGATAAAGTGGCTGAACCATCAAATGTTTCAAGAAGCACTCAACAATTTCAAGGAAAAGACAAAACAGATACTGGTCCTGAAGTTGGAAATCAAAAATCTCAAGAAACAAAGAAGAAAGACTCTAAAATAGATGTCCAAGAGTCAACAAAAAGTAAACAACCACAGTCCCCTGCATATCAACAATGCATAAACAAAGATCAGGAAGAAAGCCATGGAATACATAAAATTGAAGAAAAAGCCTATACAGAGGAGCAAAAAGAATGTAAAGAGGAAGAGAGTGGAGGGAAAAAGGATGACACAAAAGGGTCAAAGAAACTGTTTGTTCCTTTGGTGATAGCAGCAGGATCAGCCCTCCTTGTCTCTCTAGTAGTTATCTTTGTTCGGCATAGAAGAGCTAGAAAAAGGTACACATGA 5199 0.3776 MELELGLKIIKTRDDIDSLSEYQLAKDKAGPVFKSRETNTMFILTGYLKGYKKNTIDIKISEDGSKILISGKKPIQEMLIMGWVMHRKDVEIRGFKKVFKIPDGVILDRIKAKYDDEEWILNIFMPKLVKGISGARIEEIKEEESERGRLEQEKSETDHVLRSVGETSQKGSKESEVQEMEDSKSVMEKKEGEVSDKMLDNANTEKNKETIEKEVEESTLRIEDENGERKKVKVGKEGYEIMKTSEEEKNVGVHISQKDADTSHDQVSEVKRMKDSKNVEKEGGISDKMLNDSNRNMLGEMIQKEIEESELGVEDGDGEKWKEKVGKEGREAMKTSELEQNVGEHITQIIGDTSQGDSKEPMIQQMGEAKSTVEKMEREESGKILVKANEFGKTSELDQNVADHIPSNIDGISEEEFKQSKIQQMEKTESIEWKMGRGESERKPVEAKKDIHKTISGDTIQKDIKKPKTETKDENKKCVSEKDGKKGVDAMTIRQESPKQLPKAALEEREGLNVPKMQKTEDVKEEMVERKGKEVEYFVKKGEGKGTKRMHVEAKKDIIKKKIQEEIEKTKNEIKDSGEQHVLENTVREGMAETGSSMEKVEGEESKKRTKEASWVTEKSSVTETLQKETEVYNIERKARDEQEKLPKQMVEAIAQDEDKTEYGDVNLKEEGSTKMHIEPNEVFEEETTGDRIEKEISKQKLESSDSLRGKENADHGGSDGSKRQKSPEMGENEDVKKEGAKIAQVIKRVKGEKHEKMQVEANGGLKNDITRKTTGKETEEPKILIKEKDQQCLQEEVSKGRNEASTTAGESPMRIVDSLAKTREGPKDKEIESAEEIKEEVAKRKSKETKVIESTPKEKILEYEGERITQTLHQVPEEKHPKALEIGTPERELQPANGPTTCEVAASVGFKEVEQGSAKDKTQKTEMLPPKIQSKETHDSKNESVNQDILKPEKTKEVEREQCTHDTESTKQVATIEDQVAKPLSAPRFPAIQQSKAEEKDKLYDEGSKEKCKASLESRKEDPPKDKQNLIEMKENQEAKQMETLKPEIPLEKGGQVILKDEFQKGQKEGETMLEKTEWPKKKFDDRDQQFVQRDVGKGVGNVETIGMEMPKEECVADAGTLAERIETKRDLKASLEREEYKTTQNVNDEKPRIEEEIRKADIGKVDDKAKYFEESMKTTQEKELPISVTSMEVEEAVPKNEIKELNQKELSPLTAEMKSKEPLELEKSIMEWKFPKTKEYVPVPKSEDIKAPKIAAYQGAKPSTLQRPTLIQQSIDEENRKSENVVEAHEATRESPKKDIEENEEMGSLQPQVHEENQCFEEEQKFDWQEEALDQYGFQGPKILTEDRGQQYAQESNDKKGYQTRDAVEEESLKREHREEMVLEKREGPKVAKSGEGNEASRQLLKREKGETKTADEKHKMKEITPELEKANGFEQVAEKMHATRDREHQREPEEITSKMGVEPPTTIEITPNKGIENKEPRELSWPSMDYESPKIEEVEQEKEKERHIHALEATVSKEEGLAQATATHSKPKGDIDEPQVNQLPSPLSKEPRELDKFSTKEDDSKVESLVQVGERKESIHSIEDTAASEVVADKVAEPSNVSRSTQQFQGKDKTDTGPEVGNQKSQETKKKDSKIDVQESTKSKQPQSPAYQQCINKDQEESHGIHKIEEKAYTEEQKECKEEESGGKKDDTKGSKKLFVPLVIAAGSALLVSLVVIFVRHRRARKRYT* 1733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01070 1732 Coils Coil 201 228 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 307 380 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1361 1395 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1059 1090 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 409 530 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 501 530 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 638 833 - -
Rops5g01070 1732 SUPERFAMILY HSP20-like chaperones 31 129 IPR008978 -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1495 1517 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1627 1642 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 340 361 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 771 797 - -
Rops5g01070 1732 Gene3D - 28 131 IPR008978 -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1552 1586 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 143 193 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 172 193 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 409 492 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 872 888 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1643 1661 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 798 813 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 872 1030 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 598 613 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 307 338 - -
Rops5g01070 1732 Coils Coil 560 580 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1277 1311 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1044 1090 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 143 163 - -
Rops5g01070 1732 Coils Coil 140 160 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1402 1460 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 638 762 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 995 1030 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 243 293 - -
Rops5g01070 1732 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 143 IPR002068 -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1662 1697 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 243 288 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1318 1332 - -
Rops5g01070 1732 CDD ACD_sHsps-like 36 127 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1277 1697 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 1601 1616 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 915 968 - -
Rops5g01070 1732 MobiDBLite consensus disorder prediction 571 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01070 Rops-Chr5 21959123 21964757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01070 - - lang:109355053 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01070 5 21959123 21964757 Rops5g01070 5 21959123 21964757 ECH