Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01065 ATGAAAACTCTGATTTGTGCATCAAACCCAACACTCTATCTCTCAAAACATTCTCCTTGGAAACCCAAGTTCCCAGCTTTTGACCCCAGAACTGCAGAAAAACTCAACTACCCCTTAAGCACATTGAAGCCACAAGCTAATGCCAAAGGCTTCTCTAGTAGACCTTCAACTGTGGAAAGTGATGCCACTAGCAACAAGAAGAGGCCTATCAAAGAAGAAAACAATGGGGATGATGAGATTCCCAAGGTAGTTTTATATAGGATAATAGGTAGAATCTTGTTTTCTGTTGGGGTACCAATGGGGTTGGGTTTGGCATTCTTGTTTCTTTTTGGTGAGCTTAAGGAAAGACACATATGGGATGTGCCCTTATGGTTCCCATTCTTGACAACTTTGTTGACTTTTGGGGCTTCCACCCTTGGAATTGCATATGGGGCACTGTCCACTAGTTTGGATGAAGAGAGGGAAGGTTCATTTCTTGGATTGGAAGAAGTTCAGAAGAATTGGGTAGAGATGTGGCAGGAAGATGATGCAAGCTAG 537 0.4283 MKTLICASNPTLYLSKHSPWKPKFPAFDPRTAEKLNYPLSTLKPQANAKGFSSRPSTVESDATSNKKRPIKEENNGDDEIPKVVLYRIIGRILFSVGVPMGLGLAFLFLFGELKERHIWDVPLWFPFLTTLLTFGASTLGIAYGALSTSLDEEREGSFLGLEEVQKNWVEMWQEDDAS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01065 178 MobiDBLite consensus disorder prediction 45 63 - -
Rops5g01065 178 PANTHER PROTEIN PAM68, CHLOROPLASTIC 1 177 IPR021855 -
Rops5g01065 178 MobiDBLite consensus disorder prediction 45 74 - -
Rops5g01065 178 Pfam Photosynthesis affected mutant 68 48 174 IPR021855 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01065 Rops-Chr5 21698361 21699139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01065 - - gmx:100782877 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01065 5 21698361 21699139 Rops5g01065 5 21698361 21699139 ECH