Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01064 ATGGAAGAATTTGAATACCCATGTTGTGAGCTCAAATTCTGGTTATTTCTGATTATATGTCTGGTGGTTGTGTCATTGGCAGGCATTGCTTCAGGCCTAGCTCTAGGACTACTTTCATTCAGCCAAGTTGATCTTGAAGTCCTTATTAAAGCAGGCCGTCCAAAAGACAGAAAGCATGCAGAAAGGATTCAGCCATTTGTAAGGAATGGACATTTTGTCCTGTGTACACTTCTTCTAGGAAAATGTCTGGCTATGGAGGTGCTAGATTGGGCTCTAGGGAAAGAACATTCAGTTCTTCTGAGAAGATCGGAGTTGAAGACATTTGTGGACTTACATGCCAATGAGGCAGGGAAAGGTGGAGAGTTGTCACATCATGAAACTTCCATAATTACAGGTGCTATGGATTTGACTCAAAAGACAGCTAAAGATGCAATGACATCAATATCTGAAACTTTTTCTCTTGATATAAATTCCAAACTAGACATGGTTTATGAAAATTGGCCACTATATGAGATATTGAATCAATTCAAGAAGGGTCACAGTCATATGGCTGTTGTCTTGAAGTGCAACATGGACACAGATAGCACTGCAGCTTATGCTGCGGATACACCAACCATGTTGAATATAATTACTCAAAAAACATTAAACCAAGCTCAAATTACTGAAGAATCTAATTCTTCCTTTGTCCTGGAAATGAGTCCAAGAAGTTTTATTCATGAATCCACTAGGTGTTCTAGTGATGTGGAATTTCATAGTCCAACATTACGAAATGTCATGGAGCTAGACAATGAACTACGTGAAGAATCCAAACAGTGGGAGCAAGAAATTGGATATATTTCACAAGAACAAATAGAGTCTCTTCCAACTTTCCCGGACGAGGAGGTGATTGGCATCATTACAATGGAGGATGTTATTGAGGAACTATTACAGGGAGACATACTGGATGAAACTGATGAATATGTTCACGTTCAAAAGAACATTAGAATTAACCTGCGGCAATCACAAAGATCACAATCGAGATCATCAAGGAGAGCTTCTTGGTCTGGTCGTCGTTGA 1056 0.3939 MEEFEYPCCELKFWLFLIICLVVVSLAGIASGLALGLLSFSQVDLEVLIKAGRPKDRKHAERIQPFVRNGHFVLCTLLLGKCLAMEVLDWALGKEHSVLLRRSELKTFVDLHANEAGKGGELSHHETSIITGAMDLTQKTAKDAMTSISETFSLDINSKLDMVYENWPLYEILNQFKKGHSHMAVVLKCNMDTDSTAAYAADTPTMLNIITQKTLNQAQITEESNSSFVLEMSPRSFIHESTRCSSDVEFHSPTLRNVMELDNELREESKQWEQEIGYISQEQIESLPTFPDEEVIGIITMEDVIEELLQGDILDETDEYVHVQKNIRINLRQSQRSQSRSSRRASWSGRR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01064 351 ProSiteProfiles CNNM transmembrane domain profile. 9 88 IPR002550 -
Rops5g01064 351 SUPERFAMILY CBS-domain pair 131 319 IPR046342 -
Rops5g01064 351 Gene3D - 199 316 IPR046342 -
Rops5g01064 351 Gene3D - 101 198 IPR046342 -
Rops5g01064 351 PANTHER METAL TRANSPORTER CNNM 4 88 IPR045095 GO:0010960
Rops5g01064 351 Coils Coil 255 275 - -
Rops5g01064 351 Pfam Cyclin M transmembrane N-terminal domain 18 88 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01064 Rops-Chr5 21692478 21696762 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01064 K16302 - gmx:100791387 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01064 5 21692478 21696762 Rops5g01064 5 21692478 21696762 ECH