Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01058 ATGAGAGTGCAAAACGCTGAGTTTCGAGTTTCGACAACACAGGGTTCAAGTTTACTTCAGCTGTGGGTTGTTCAGGTCCTAAGGATGCTTACACTGACAGATTCTCCACTACTTATTTCTAGAACATTTGAAGAAATTAAAATACCAACAAGTAAACGAAGCACTGTGGTATGTGCTGCAAAAGGTCCAAGACCAAGATATCCCCGAGTTTGGAAGACCCATAAAAAAATTGGAACCATTTCCAAAGCTGCTAAGCTTGTTCAGTCTATTAAGGAGCTGTCAAATGTCAAAGAGGAAGTTTATGGAGCTCTTGATTCTTATGTTGCATGGGAATTAGAGTTCCCTTTAATTACAGTGAAAAAGGCACTCAAGACTCTAGAATACGAACAAGAATGGAAGCGGATAATACAGATAACAAAATGGATGTTAAGCAAAGGTCAAGGAAAGACAATGGGAAGTTATTTCACATTGCTTAATGCTTTAGCAGAGGATGACCGACTTGATGAAGCAGAAGAGCTTTGGACAAAGTTATTGATGCAGTACATGGAAAGCTTGCCTCGTAGATTCTTTGATAAAATGATATCTATCTACCGTAAGAGGGGCATGCATGAGAAGATGTTTGAGGTATTTGCAGACATGGAAGAGCTTGCCGTTCGACCTAGCATTTCTGTTGTCTCAATGGTTGGAGATGTCTTCAAGGAGCTGGGTATGATGGACAAATACGAGAAGTTACATAGAAAATATCCACCACCTAGATGGGAATACAGATACATCAGAGGAAAGCGCGTAAGAATCAGCGTGCAAGGCCAGTCTAATCAAGTGAACAACTTCATAGAAAAGCATGACAATGTTGAACCAAATTCAGACTCAAACGAGGATGATGGATCTGAAGAGACTTCAGAGGTTATTGATGATGAGAAATTCAAACAGGATGACCAGGTAACATGCATGGAACCTGAACAAATTTCAGATGAGTCATATGAGAGTATGGAACCAGTTTTAGATGTATAA 1011 0.3976 MRVQNAEFRVSTTQGSSLLQLWVVQVLRMLTLTDSPLLISRTFEEIKIPTSKRSTVVCAAKGPRPRYPRVWKTHKKIGTISKAAKLVQSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEYEQEWKRIIQITKWMLSKGQGKTMGSYFTLLNALAEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYRKRGMHEKMFEVFADMEELAVRPSISVVSMVGDVFKELGMMDKYEKLHRKYPPPRWEYRYIRGKRVRISVQGQSNQVNNFIEKHDNVEPNSDSNEDDGSEETSEVIDDEKFKQDDQVTCMEPEQISDESYESMEPVLDV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01058 336 PANTHER OS01G0757700 PROTEIN 46 302 IPR044646 -
Rops5g01058 336 MobiDBLite consensus disorder prediction 275 336 - -
Rops5g01058 336 Gene3D Tetratricopeptide repeat domain 72 329 IPR011990 GO:0005515
Rops5g01058 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 220 IPR002885 -
Rops5g01058 336 Pfam PPR repeat 193 215 IPR002885 -
Rops5g01058 336 Pfam PPR repeat 156 177 IPR002885 -
Rops5g01058 336 NCBIfam pentatricopeptide repeat 191 221 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01058 Rops-Chr5 21607704 21612893 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01058 - - psat:127138361 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01058 5 21607704 21612893 Rops5g01058 5 21607704 21612893 ECH