Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01020 ATGTCTCAGTTTGTGGCTACACGATCCATTCAGAGCACCCTTTTGTGCCCTGGTCCTGGATCTGCACATGACAGGGCTCAGAAACTGTTAAAGCCTGCAACTTTCTCTTCCAAGGTGTTCCCACCAGAAGGTAACAAGTCCTCCCAAGTTGGCTTCAGAAGCTTTCAGATCAGTGCAAGGAAATCAGCACCTGCTGAAGTTATCCCTGTATCACCAGAAGATGATCCAAAGATTGAGGAGCATTTGCAGCATTTGCGTGGGGTGCAGCCTTTTGGTGACACTTCGGTTGGAATGTGGTCGAAGCCTGCGTTTAGGCGTAAGACAAAGATAGTTTGTACTATTGGACCTTCGACCAATACCAGGGAAATGATTTGGAAGCTGGCTGAGGCTGGGATGAATGTTGCTCGTCTTAACATGTCTCATGGAGACCATGCCTCTCATAAAAAAGTTATTGACTTGGTTAAAGAATATAATGCACAATCTAAGGACAATGTAATTGCAATCATGCTTGACACTAAGGGTCCTGAGGTTAGGAGTGGGGATTTACCACAACCAATCACATTATCAAGTGGGCAGGAATTCACATTTACTATTCAGAGAGGTGTTGGAACTGCAGATTGTGTCAGTGTGAACTATGATGATTTTGTCAATGATGTGGAAGTGGGGGACATGATCCTTGTCGATGGTGGTATGATGTCTATGATGGTTAAGTCTAAGACAGAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGCGACATTTGAATGTTAGAGGGAAAAGTGCAACACTGCCTTCAATCACTGAGAAGGATTGGGATGATATCAAATTTGGAGTGGATAATGGAGTTGACTTCTATGCTGTTTCCTTTGTTAAGGACGCTGAAGTTGTTCATGAACTGAAGAATTATTTGAAGAGCCGTGGTGCTGATATACATGTCACCGTAAAAATTGAAAGTGCAGACTCTATACCAAACTTGCATTCAATTATCACCGCGTCTGATGGGGCTATGGTTGCCAGAGGAGATCTTGGTGCTGAGCTCCCTATTGAAGAGGTTCCTCTTTTGCAGGAAGAGATAATCAACTTGTGCCGAAGCATGGGAAAGGCTGTTATTGTTGCAACTAATATGTTGGAAAGCATGATTGTCCACCCAACTCCAACCAGAGCGGAAGTATCAGATATAGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTGTCTGGAGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTTGCATTACGGACAGAAGCCACTATACCAGGCAGTCAAATGCCTCCTAATATCGGTCAAGTATTAAAGAATCACATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCAAACACCCTTGGAACCTCGACTGTTGTCTTCACTAGAACAGGGTTCATGGCTATCCTACTGAGTCACTATCGTCCTTCTGGCACCATATTTGCTTTTACGGATGAGAAGAGGGTACAACAGAGGTTGGCTTTGTATCAAGGAGTCTGTCCTATATACATGGAATTCTGTGATGATTCTGAAAAGACTTTCAGAAGAGCCTTGGATTTGCTGCAGGAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTGGCACTTGTGCAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCCACTCACAATATCCAGGTAAGGAAAGTGTAA 1728 0.4381 MSQFVATRSIQSTLLCPGPGSAHDRAQKLLKPATFSSKVFPPEGNKSSQVGFRSFQISARKSAPAEVIPVSPEDDPKIEEHLQHLRGVQPFGDTSVGMWSKPAFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHKKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLSSGQEFTFTIQRGVGTADCVSVNYDDFVNDVEVGDMILVDGGMMSMMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNGVDFYAVSFVKDAEVVHELKNYLKSRGADIHVTVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGSQMPPNIGQVLKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCDDSEKTFRRALDLLQEQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01020 575 FunFam Pyruvate kinase 176 269 - -
Rops5g01020 575 NCBIfam pyruvate kinase 106 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 Pfam Pyruvate kinase, alpha/beta domain 463 555 IPR015795 -
Rops5g01020 575 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Rops5g01020 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 440 IPR015813 GO:0003824
Rops5g01020 575 SUPERFAMILY PK C-terminal domain-like 424 575 IPR036918 -
Rops5g01020 575 Gene3D - 108 433 IPR040442 -
Rops5g01020 575 PANTHER PYRUVATE KINASE 84 553 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 FunFam Pyruvate kinase 437 556 - -
Rops5g01020 575 FunFam Pyruvate kinase 271 436 - -
Rops5g01020 575 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Rops5g01020 575 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 Pfam Pyruvate kinase, barrel domain 106 442 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops5g01020 575 Gene3D - 447 575 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01020 Rops-Chr5 20556248 20565988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01020 K00873 - gmx:100803036 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01020 5 20556248 20565988 Rops5g01020 5 20556248 20565988 ECH