Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00947 ATGACGGATGTGATACTGCATATATATGATGTGACGAATAGTGGATCGGAGAAGACGAACAACACCATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTCGGTGGTATATTCCACAGTGCCGTTCAGGTTTATGGAGATGATGAATGGTCATTTGGATTCTGTGAGCAAGGTACTGGAGTTTTCAGTTGCCCTTCTGGAAAGAATCCAATGTATACATATCGTGAAGCTATTATTCTAGGGAAAACAAACTTTTCCATTTTCAAGGTGAATCAAATATTAAGAGAACTCAGCAGAGAGTGGCCTGGAAGTTCGTATGATCTATTGGCCAAAAACTGCAACCACTTCTGTGATGAATTCTGTGAAAGGCTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCTAACGCTGGTGATACAGCTATGGAAGTGGCTGAAACTACAGCATTACGGCTCCGGCAAGCGAAAACAGAGATTGTATCAGCAAGCAAAGTAGCATACAGGTTCCTCTTAGGTGTTACTAATAATGTTACCAATAATGTTAAAAATGGCCCCGAGTCCCCTAACAATTCAAACAGAGGAGGATCCCCTAGAGTTCAAGCTTCTTGGTTGAAAAATATTATTACGAATGGTGCTAAACCATCTACTAGCTCAGAAGCTGAGAATCAGAATGGGGTTGTGCCTCTACAACCTACAAGAGAAGATGACAAGGCTCTGTTACAGAGTTCATCATCACATGATAGTTGA 759 0.4137 MTDVILHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGKNPMYTYREAIILGKTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAETTALRLRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPESPNNSNRGGSPRVQASWLKNIITNGAKPSTSSEAENQNGVVPLQPTREDDKALLQSSSSHDS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00947 252 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Rops5g00947 252 MobiDBLite consensus disorder prediction 182 233 - -
Rops5g00947 252 PANTHER DESUMOYLATING ISOPEPTIDASE 2 216 IPR008580 GO:0008233
Rops5g00947 252 Gene3D PPPDE domains 1 169 IPR042266 -
Rops5g00947 252 Pfam PPPDE putative peptidase domain 3 147 IPR008580 GO:0008233
Rops5g00947 252 SMART DUF862_2a 2 155 IPR008580 GO:0008233
Rops5g00947 252 MobiDBLite consensus disorder prediction 182 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00947 Rops-Chr5 18296795 18300711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00947 - - gmx:100814440 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00947 5 18296795 18300711 Rops5g00947 5 18296795 18300711 ECH