Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00929 ATGGCTTCTCGTTACGAAGTCGAAGTGAAGCCCACATCAGCTCACGGGCTCAAAAACGTGAACTGGCGCCACGGCTCGAATCGACCATACGCCGTCGTTTGGGTCGACCCAAAGAACAAACGCTCAACAAGAGTGGACGAAAACGGTGACACGGAAGCTAACTGGGACGAAACCCTCGTAATCCTTTTACCCCCTGAACCCATTGAAGATCTCACACTCTCCATCGACATCGTCCACGCCGGCTCAGAAGAAGACACCAAGCCACTCATCGGCTCGGCTCGGCTCAAGCTAGCCGATATCCGCAACGATGTCGGAATCGGCGAGCGAGCCAGCAGAACACTCACGCTGAAACGACCTTCTGGAAGACCACATGGGAAGGTTGACGTTAAGGTTACAATCAGAGAGCCTAGCTATCGTGCGCAGGGTGGGTATTATCCTGCTCCTTACGGTGTCCCGCAATCACGGGATTATCCCCCTGCTCCGCAGGCTTATGGGTCCCCATACGGCGCTCCACCTTCGCCGCAGGATTATAGTTATGGAAGTTATTCCGCGCCACCATCGGGGTATCCTTATAATGCGCCTCCGCAAACGGCGTCGTATGGTTCGGGATATCCCGCTCAAACGGCGTCGTATGGTTCGGGATATCCCGCTCAAACGGCGTCGTATGGTTCCGGATATCCCGCTCAAACGGCGTCGTATGGACAGGGGAGTTATGGGAATGCGCCAACGGAGGAGAAGAAGAAGAGTAAGTTTGGTGGGATGGGGACGGGATTGGCTGTGGGTGCGGTTGCTGGGGTTCTTGGTGGAATCGCATTGGTGGAGGGTGCTGAGTACGTGGAGAATAAGATTGCTGATGACGCGGCAGAAAAGGTTGAGGATGATCTTGGTTATGATGATGATGATGGTGGTTACGATGGAGATGATTTCTAG 930 0.543 MASRYEVEVKPTSAHGLKNVNWRHGSNRPYAVVWVDPKNKRSTRVDENGDTEANWDETLVILLPPEPIEDLTLSIDIVHAGSEEDTKPLIGSARLKLADIRNDVGIGERASRTLTLKRPSGRPHGKVDVKVTIREPSYRAQGGYYPAPYGVPQSRDYPPAPQAYGSPYGAPPSPQDYSYGSYSAPPSGYPYNAPPQTASYGSGYPAQTASYGSGYPAQTASYGSGYPAQTASYGQGSYGNAPTEEKKKSKFGGMGTGLAVGAVAGVLGGIALVEGAEYVENKIADDAAEKVEDDLGYDDDDGGYDGDDF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00929 309 MobiDBLite consensus disorder prediction 291 309 - -
Rops5g00929 309 MobiDBLite consensus disorder prediction 287 309 - -
Rops5g00929 309 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Rops5g00929 309 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 134 IPR035892 -
Rops5g00929 309 SMART C2_3c 6 109 IPR000008 -
Rops5g00929 309 Gene3D C2 domain 1 135 IPR035892 -
Rops5g00929 309 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Rops5g00929 309 PANTHER INGRESSION PROTEIN FIC1 7 262 - -
Rops5g00929 309 MobiDBLite consensus disorder prediction 142 181 - -
Rops5g00929 309 Pfam C2 domain 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00929 Rops-Chr5 18019356 18020285 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00929 - - gmx:100817630 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00929 5 18019356 18020285 Rops5g00929 5 18019356 18020285 ECH