Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00928 ATGGCATCTCGCTACGAAGTTGAAGTGAAGCTTTCATCGGCTCGTGGGCTGAAGAACGTGAATTGGCGCCACGGCTCCAACAAGCCATACGTCGTCGTTTGGGTTGATCCAAATAACAAGCTTTCCACCAAGGTGGACGGAGCCGGTGACACCGAAGCTGAATGGAACGAGACACTTATAATCCCTTTGCCACCGAAGCCTCTAGAAGATCTCACTCTTTACATCGACATCGTCCACGCTGGCTCAGAAGAAGGCACCAAGCCGCTCATCGGCTCGGCTCGGCTCAAGCTCACTGAAGTCATCGATGATGTTGGAATCGGGGAGCGTGCGAGCCGAACTCTCACTCTGAAACGACCTTCTGGAAGGCCACAAGGGAAGGTTGACGTTAAGGTTGTAATCAGAGACCCTAGCTATCGTGCGCAGGGTGCGTACCATCCTCCTCCTTATGGTGTCCCTCCGCCAGCGCAATCGCGGGATTTTTCACCTGCTCCGCCGGCTTATGGTTACCCATACGGCTCCCAACCACAACCACAGGGTTCTTATTATTCTGCTGCGCCACCGTCGGGTTATCCTTACAATGCACCGCCTCAAACGGCGTCGTATGGATCTGGGTACCCAGGACAAACGGCATCGTATGGATCTGGGTACGCTGCTCAAACGGCGTCGTATGGGCAGGGGAGTTATGGGTCCGCGCAGCCAGCACAGGGGAACAAGAGTAAGTTTGGTGGAATGGGGACGGGATTGGCTGTGGGTGCGGTTGCTGGGGCTCTTGGTGGAATCGCACTGGTGGAGGGTGCTCAGTATTTTGAGAACAAGATTGCTGATGACGTGGCAGAGAAGGTTGAGGATGATCTTGGTTATGATGATGGTGGTTACGATGCAGTCCTCCTCTCCCCAAACCGATCTCACTGGAACAATAGGAGGAGCATTCCCAGAGGTCTGATTGTGACGTCTCGATCAACGGTGCTTCGTCATGTAGGTGTTGAGACTGAAATGATGTCAAATGCCATAGATGATGCCTTGGATAATGAAGTTGAAAAGGAGACTGAAGAGCTAACTAATCGGTTTACTAGAAGGACCATTTTATTTCAAACGCATTTACTCTGGAGTCTAACTTGA 1119 0.521 MASRYEVEVKLSSARGLKNVNWRHGSNKPYVVVWVDPNNKLSTKVDGAGDTEAEWNETLIIPLPPKPLEDLTLYIDIVHAGSEEGTKPLIGSARLKLTEVIDDVGIGERASRTLTLKRPSGRPQGKVDVKVVIRDPSYRAQGAYHPPPYGVPPPAQSRDFSPAPPAYGYPYGSQPQPQGSYYSAAPPSGYPYNAPPQTASYGSGYPGQTASYGSGYAAQTASYGQGSYGSAQPAQGNKSKFGGMGTGLAVGAVAGALGGIALVEGAQYFENKIADDVAEKVEDDLGYDDGGYDAVLLSPNRSHWNNRRSIPRGLIVTSRSTVLRHVGVETEMMSNAIDDALDNEVEKETEELTNRFTRRTILFQTHLLWSLT* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00928 372 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Rops5g00928 372 MobiDBLite consensus disorder prediction 146 160 - -
Rops5g00928 372 PANTHER INGRESSION PROTEIN FIC1 7 252 - -
Rops5g00928 372 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Rops5g00928 372 MobiDBLite consensus disorder prediction 139 184 - -
Rops5g00928 372 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 134 IPR035892 -
Rops5g00928 372 Pfam C2 domain 7 100 IPR000008 -
Rops5g00928 372 SMART C2_3c 6 109 IPR000008 -
Rops5g00928 372 Gene3D C2 domain 1 134 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00928 Rops-Chr5 18001212 18004592 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00928 - - gmx:100817630 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00928 5 18001212 18004592 Rops5g00928 5 18001212 18004592 ECH