Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00888 ATGGCCTTTAACATCAGCTTGGGAAGTTTGGTGATAGTTGCCCTTGCATTTTTTGTCTCCTTGCAAGGAACTCTTGGGGGTATAGAATGTGAGCATCTGAGCCATGACACATGCGCATTTGCAGTGTCATCTGCTGGAAAACGCTGTGTGCTTGAGAAGCATGTGAAGAGGACTGGGGAAGAAGCATACACATGCAAAACATCTGAGATTGAAGCTGATAAACTCAAAGACCACATTGAAACTGATCAATGCATCAAGGCTTGTGGGTTGGACAGAAAATCCCTTGGAATCTCATCTGATTCTCTTCTAGAATCTCACTTCACAATAAACCTCTGCTCCCCTCAGTGCTATCAAAACTGCCCCAACATTGTTGACCTGTACTTCAACCTTGCAGCTGGTGAAGGTGTGTTTCTTCCCAAGTTGTGTGAAGCAAAAGGTGGAAATGCTCGTCGAGGCATGGCTGAGATCAAAAGCTCTGGTATTGTGGCACCAGGACCAGTGCACTCTGCGCAGTTCACAGCTACTCCTCCAGAACCTTTTGAAGCTGTTGAACTCACAGCTGAACCTGTAGTTGCACCAGCATACCCTCCATACTAA 597 0.4623 MAFNISLGSLVIVALAFFVSLQGTLGGIECEHLSHDTCAFAVSSAGKRCVLEKHVKRTGEEAYTCKTSEIEADKLKDHIETDQCIKACGLDRKSLGISSDSLLESHFTINLCSPQCYQNCPNIVDLYFNLAAGEGVFLPKLCEAKGGNARRGMAEIKSSGIVAPGPVHSAQFTATPPEPFEAVELTAEPVVAPAYPPY* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00888 198 Pfam PAR1 protein 28 182 IPR009489 -
Rops5g00888 198 PANTHER PAR1 PROTEIN 10 176 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00888 Rops-Chr5 17116214 17118228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00888 - - gmx:100784217 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00888 5 17116214 17118228 Rops5g00888 5 17116214 17118228 ECH
Rops5g00888 5 17116214 17118228 Rops6g02733 6 49120945 49122412 PCT