Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00871 ATGAGAAATAACAACATTGTGGTTGGGCTGGGACAAGAAAATTACGGATCGGGGCATTTTCGTCATTTCAGGGACAAAATCTGGTTTCCATTAATGAAATCTATGTCGAGATCCACCGTCGTTTTGGCCTTCCCCGTTGTCCTCATCGTCGGCGCGTTGGTGTACACGCGCTTCCTCGGCACACATGAGGTCTTTCCAGCAGGTTCATCTACCAAATCATTACGAACCACCACAGTAAACAAAATACCAAACAAAAAGCAAATAGAGATCCCATTGAACTGCAATGCATACAACCTCACAGGAACATGCCCCACCAAAAATCATCCTCCAATCTCATGGGATGATCAGGACCGTTCATCCAGTCCCATGTGTCCAGAATACTTCCGTTGGATCCATGAGGATTTGAGGCCATGGGCCCACACAGGCATAACAAAGGAGATGATGGAGAGGGCAAAAACCACAGCAAATTTCAAGTTGGTGATATTGAATGGGAAGGCTTATTTAGAGACTTATGAGAAGGGCTTTCAAACAAGGGATGTTTTTACACTCTGGGGGATTCTACAATTGTTAAGGAGGTACCCTGGAATGGTGCCTGATTTGGAACTAATGTTTGATTGTGTAGATTGGCCTGTGGTTTTAGCAGATCAGTATAATGGGCCTAATGCTGAGGACCCACCACCACTCTTTCGTTATTGTGGTAATGATGCCACCTTGGATATTGTCTTCCCTGATTGGTCCTTCTGGGGATGGTCTGAGGTTAATATAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAAGGCAACAAGAGGAAAACATGGATGAACAGAGAGCCTTATGCTTATTGGAAAGGAAATCCCACTGTTGCTGAAACTAGACAAGACCTCATGAAATGCAATGTTACTGATAAACAAGATTGGAATGCTCGTTTATATGCTCAGGATTGGGGACGGGAATCACAAGAAGGGTACAAGAAATCAGACTTGGCAAGCCAATGCACTCATAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTCAGTGAAAAATACATTCTAGCATGTGATTCTCCCACTTTACTTGTAAAACCTCATTACTATGATTTTTTTACAAGAGGGTTACTTCCAGGGCACCATTATTGGCCCATTAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCTGTGGATTGGGGCAATAGTCATATGGAAAAGGCACATAATATTGGAAAAGCAGCAAGTAATTTCATTCAAGAAGAGTTGAAGATGGATTATGTGTACGACTACATGTTTCATCTCCTTAATTCATATGCTAAACTCTTTAGATACAAACCGTCTATAAGTGCTAATGCTACTGAACTATGTGTGGAGTCAATGGTTTGTAGAGCAAAAGGGTTAGAAAAGAAATTTATGATGGAATCATTGATCAAGGGTCCTCCTGCAAACACCAATCCATGCACCATGCCTTTCCCGTATGATCCTCCATCTTTGCATGCTCATATAAGGAGAAAGGAAGGTTCCATCCAACAAGTTGAATTTTGGGAGAAAAATTACTGGGAGAAACAAAATATGAAATCTTAA 1584 0.4179 MRNNNIVVGLGQENYGSGHFRHFRDKIWFPLMKSMSRSTVVLAFPVVLIVGALVYTRFLGTHEVFPAGSSTKSLRTTTVNKIPNKKQIEIPLNCNAYNLTGTCPTKNHPPISWDDQDRSSSPMCPEYFRWIHEDLRPWAHTGITKEMMERAKTTANFKLVILNGKAYLETYEKGFQTRDVFTLWGILQLLRRYPGMVPDLELMFDCVDWPVVLADQYNGPNAEDPPPLFRYCGNDATLDIVFPDWSFWGWSEVNIKPWEILLGELKEGNKRKTWMNREPYAYWKGNPTVAETRQDLMKCNVTDKQDWNARLYAQDWGRESQEGYKKSDLASQCTHRYKVYIEGSAWSVSEKYILACDSPTLLVKPHYYDFFTRGLLPGHHYWPIKEDDKCRSIKFAVDWGNSHMEKAHNIGKAASNFIQEELKMDYVYDYMFHLLNSYAKLFRYKPSISANATELCVESMVCRAKGLEKKFMMESLIKGPPANTNPCTMPFPYDPPSLHAHIRRKEGSIQQVEFWEKNYWEKQNMKS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00871 527 Pfam Glycosyl transferase family 90 120 516 IPR006598 -
Rops5g00871 527 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 100 521 - -
Rops5g00871 527 SMART cap10 196 445 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00871 Rops-Chr5 16772863 16781012 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00871 - - gmx:100789969 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00871 5 16772863 16781012 Rops5g00871 5 16772863 16781012 ECH