Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00869 ATGTCTAATATGGTGGAGGTGAGAGTTCCAAATCTTGATTGTGAGGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAGGAGTAGATGAAGTAGAGGTTGAAATGGAGGCACAAAAAATAACAGTGAGAGGCTATGGCTTGGAGGAAAAGAAGGTGCTGAAAGCAATCAAACGTGCAGGCAAAGCAGCAGAGCCATGGCCATTTCCAGGGCATGCTCATTTTGCTTCATTTTATAAGTACCCAAGTTACATTGTTAACCATTACTATGATGCATATAAAAGTGAAGCAACAACTGGAGTCCATACTTTCTTTCACACCCCTTCTGTCTATTCTGTTGCTGTGGCATCTGATGAGGCCTTTGCTTCACTCTTTAGTGATGATAACCCTCATGCTTGCACTATAATGTAA 417 0.4101 MSNMVEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMEAQKITVRGYGLEEKKVLKAIKRAGKAAEPWPFPGHAHFASFYKYPSYIVNHYYDAYKSEATTGVHTFFHTPSVYSVAVASDEAFASLFSDDNPHACTIM* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00869 138 CDD HMA 6 67 IPR006121 GO:0046872
Rops5g00869 138 Pfam Heavy-metal-associated domain 7 64 IPR006121 GO:0046872
Rops5g00869 138 Gene3D - 2 66 - -
Rops5g00869 138 ProSiteProfiles Heavy-metal-associated domain profile. 3 67 IPR006121 GO:0046872
Rops5g00869 138 SUPERFAMILY HMA, heavy metal-associated domain 4 70 IPR036163 GO:0046872
Rops5g00869 138 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 135 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00869 Rops-Chr5 16729594 16731404 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00869 - - gmx:100802676 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00869 5 16729594 16731404 Rops5g00869 5 16729594 16731404 ECH