Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00856 ATGGCTCTGGAACTTTGGTCTACGCTGAAGGAAGCAATAGTTGCCTACACTGGCCTCTCCCCATCCACCTTCTTCACCCTCCTTGCCATTATCTTCGCCCTTTACTACATCGTTTCGGGTCTCTTTGGCTCTTCCTCTGACCATCACCGCCATGTAAGCACTAGGGACTTCGAGGAACAGATGCAGCCTCTGAAACCACCTGTTCAGATCGGTGAGGTCACAGAGGAAGATCTCAAAGCCTATGATGGCTCTGATCCTGAGAAGCCACTTCTCATGGCCATCAAGGGTAGGATCTATGATGTTTCACAAAGCAGGATGTTTTATGGTCCTGGTGGACCTTATGCTCTATTTGCTGGCAAGGATGCTAGCAGAGCTTTAGCAAAGATGTCGTTTGAAGATAAAGATCTAACTGCGGATATCTCTGGTCTTGGTTCATTTGAGCTTGAGGCTTTGCAAGACTGGGAATATAAGTTTATGGGCAAGTATATACAGGTTGGAACTGTCAAAACGACAGTACCAGTAACTGAACCTGAATCCACTGGTGAACCATCAGAATCTACTTCCCATGATGCCGAAGCTTCCAAGTCTACTGAAAATGGTTCTTCAGAAACCGTAGCTGCAGCTGTTAAAAGTGATGAAACCCCTTCAAATGTTGATGCAGATAAAGAGTAA 672 0.4583 MALELWSTLKEAIVAYTGLSPSTFFTLLAIIFALYYIVSGLFGSSSDHHRHVSTRDFEEQMQPLKPPVQIGEVTEEDLKAYDGSDPEKPLLMAIKGRIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDKDLTADISGLGSFELEALQDWEYKFMGKYIQVGTVKTTVPVTEPESTGEPSESTSHDAEASKSTENGSSETVAAAVKSDETPSNVDADKE* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00856 223 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 21 186 - -
Rops5g00856 223 Gene3D - 71 169 IPR036400 -
Rops5g00856 223 MobiDBLite consensus disorder prediction 193 211 - -
Rops5g00856 223 MobiDBLite consensus disorder prediction 173 223 - -
Rops5g00856 223 SMART Cyt_b5_2 73 169 IPR001199 -
Rops5g00856 223 FunFam Membrane steroid-binding protein 1 71 169 - -
Rops5g00856 223 Pfam Cytochrome b5-like Heme/Steroid binding domain 74 156 IPR001199 -
Rops5g00856 223 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 66 169 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00856 Rops-Chr5 16473398 16476393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00856 K17278 - gmx:100807452 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00856 5 16473398 16476393 Rops5g00856 5 16473398 16476393 ECH
Rops5g00856 5 16473398 16476393 Rops6g02769 6 49709951 49712454 PCT