Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00854 ATGATGAAACAGAACTTTCGAGGCTTGGAAAATTCTGCTTCCAGTGGCGATTATGATGAAGCATATGAGTATGTTGAAAGAGCTAGAAAATGTTTGGCAACAAAGCTTGCTGCTATGGAAAACGACAAAAACAGAGTAAAGCTAGTGGCACTCACACTATGCATACTTACACACAACACGAGACAAAGAACCGCCCAACAACACTATACTCACACAAGGGTCACAGTTACACACACTCATAAGAGACACAAAGCACAGGTTCTTTGGTTCTCCGGCCACCGGAGATTCGCCGGAGGAATGGAGGACCCGAACTCTGATGGGTGGTTGCCACCAGGTTGGACTGTGGAAGTGAGGGTGAGAAAGAATGGTAAGAGAGATAAGTATTACTTTTCCCCCTCAAGTGGACTAAAATTCAATTCAAAGGTAGAGTTATTCCGTCATCTTGACAATGCTCAGAACAACAAAGTCAGCATCCAGAGAATCTCAGACAATGTTGTAGTTGAGAAAGGTATTGCAGAAGGTTTGCCACCAGGATGGATGAAAAAGACTAGAATCACAACTAAAGGAGATACAATTAGAAGAGATTCGTACTACATTGATCCTTTAAGTGGGTATGTGTTCCGCTCCATAAAAGATGTTGATCGCTATCTTGAATCTGGAGAGATAGGAAGGAATGCATTCAAGCCAAAAGACAAAGACAGCAGTGATAAGGTGTTAAAAGCTGACATAATGTCGTCACCTGGTGTAACCGCGAAACCAACATTATCAGTTAGCTTGGGTCAGAGCTCAGGTTTGGACATGATAACCAATGACCAACAGATTCCAAGACCTGCAAGTTCAGGAGAATACATGTCTGTGTCAATCTCTAAACATATTTTCAGTCAGTGTTTCACAAATGAAGATGCCCAAGAGAAGCAACTTCAAGTAAATTCAGAGACAAAACATGGAACTGAAAAAGCCCAATCTCAAAATCACCTGCATAAACACAAGCACAAGAAAGAGATCAATTTGCCTCGTCGTGCTTCAAAGCGTCTTGCTGGAATTAAGGTTGATCCTCTTCCAGAACTTAAAACAAGAAATCGAGCACGTCGAGCTGCAGTTAAACAATCAGGTGAGGGAGAAACCACAAATGCTGATAAATCCCCCAACAGCTTGCCTAATGATTTAGCAAAACAGTTTAATGCAGTTGATGGGTCAGAAACTAAGTGCAAATCTGATGCCAATGGCACTGAAAACACACTGAACCATGCTACTGTGAAAGTCCTTGAAAATGGGGATAAGTTTGATGCAAAGTTAGATTACACCCTTGATCTTCCCCTCAAAGAACTATTAACAGACCCATGTATTGCATTTGCAATACAAACTCTGACTGGAGTAACATTTGAAACCTCTGAAAACACTCAAATTTCTTCTGAATTTAAAAACAGCCAGCACTCTGAAACTGCTGCTGCTGCTGAAGGTAAGAAAATCAATGTGCCGGGTTATGATTCGGAAGGATGCAATGTGTTTTCATCTCCAGAAAACTTTGCTATTCCACAAGAACAGGCTGGCGTTGCACAAATTGATGATAAGGCCAATGCCAATGAGAATGCAATGTCATCTTCTGAAAAGACACTTGATGAGATGTCATGGATGGATCCATGTATTGAATTTGCAATAAAAACACTCACTGGCACTATCCCATTAGACTCTGATCAAAATCCTAAGACCTGTCTTCAACAACTCAGCTCATCATCAAATACCCAACAGAGTGAGATGGCATTGTCAAGTGTCAGTTTAGGTAACTCATGTCAAAATGATTACTATTGCAGCCAATACTTTGGTACACAGAAATCAATGTTTAAACAGTCTTTTGTGGATCCAACACTGCAACACACCAGAAATATTGGCATAGCAAATTCTGGTGGAACCAGACTCCCTCACCGTGGTGGAAATTAG 1938 0.4112 MMKQNFRGLENSASSGDYDEAYEYVERARKCLATKLAAMENDKNRVKLVALTLCILTHNTRQRTAQQHYTHTRVTVTHTHKRHKAQVLWFSGHRRFAGGMEDPNSDGWLPPGWTVEVRVRKNGKRDKYYFSPSSGLKFNSKVELFRHLDNAQNNKVSIQRISDNVVVEKGIAEGLPPGWMKKTRITTKGDTIRRDSYYIDPLSGYVFRSIKDVDRYLESGEIGRNAFKPKDKDSSDKVLKADIMSSPGVTAKPTLSVSLGQSSGLDMITNDQQIPRPASSGEYMSVSISKHIFSQCFTNEDAQEKQLQVNSETKHGTEKAQSQNHLHKHKHKKEINLPRRASKRLAGIKVDPLPELKTRNRARRAAVKQSGEGETTNADKSPNSLPNDLAKQFNAVDGSETKCKSDANGTENTLNHATVKVLENGDKFDAKLDYTLDLPLKELLTDPCIAFAIQTLTGVTFETSENTQISSEFKNSQHSETAAAAEGKKINVPGYDSEGCNVFSSPENFAIPQEQAGVAQIDDKANANENAMSSSEKTLDEMSWMDPCIEFAIKTLTGTIPLDSDQNPKTCLQQLSSSSNTQQSEMALSSVSLGNSCQNDYYCSQYFGTQKSMFKQSFVDPTLQHTRNIGIANSGGTRLPHRGGN* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00854 645 SUPERFAMILY DNA-binding domain 173 222 IPR016177 GO:0003677
Rops5g00854 645 Pfam Methyl-CpG binding domain 103 155 IPR001739 GO:0003677
Rops5g00854 645 Pfam Methyl-CpG binding domain 174 221 IPR001739 GO:0003677
Rops5g00854 645 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 99 172 IPR001739 GO:0003677
Rops5g00854 645 MobiDBLite consensus disorder prediction 307 323 - -
Rops5g00854 645 MobiDBLite consensus disorder prediction 370 390 - -
Rops5g00854 645 MobiDBLite consensus disorder prediction 324 338 - -
Rops5g00854 645 MobiDBLite consensus disorder prediction 306 390 - -
Rops5g00854 645 SUPERFAMILY DNA-binding domain 106 155 IPR016177 GO:0003677
Rops5g00854 645 PANTHER OS04G0193200 PROTEIN 63 617 IPR038945 -
Rops5g00854 645 Gene3D - 160 254 - -
Rops5g00854 645 SMART TAM_2 101 175 IPR001739 GO:0003677
Rops5g00854 645 Gene3D - 104 159 - -
Rops5g00854 645 MobiDBLite consensus disorder prediction 354 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00854 Rops-Chr5 16399600 16410317 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00854 - - gsj:114388973 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00854 5 16399600 16410317 Rops5g00854 5 16399600 16410317 ECH